Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SNRPFP2-201ENST00000440710 251 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 AC009237.4-201ENST00000441078 238 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 AC093799.1-201ENST00000452411 499 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 TPT1P1-201ENST00000458495 518 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 AC023818.1-201ENST00000498379 384 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 SNORA19.3-201ENST00000516165 130 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.97□□□□□ -1.29
COL6A2P12110 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.97□□□□□ -1.29
COL6A2P12110 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
COL6A2P12110 NDUFA3P4-201ENST00000560814 250 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.97□□□□□ -1.29
COL6A2P12110 MIR4470-201ENST00000583453 72 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 AC025165.5-201ENST00000602802 578 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL6A2P12110 AC231759.1-201ENST00000616455 597 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.97□□□□□ -1.29
COL6A2P12110 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 AC119674.1-204ENST00000641348 1343 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 CLCA3P-203ENST00000490028 2781 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.97□□□□□ -1.29
COL6A2P12110 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
COL6A2P12110 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
COL6A2P12110 FO082842.1-201ENST00000423552 1370 ntBASIC6.96□□□□□ -1.29
COL6A2P12110 AC005261.6-201ENST00000623072 1387 ntBASIC6.96□□□□□ -1.29
COL6A2P12110 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL6A2P12110 AL049634.1-201ENST00000453770 1720 ntBASIC6.96□□□□□ -1.29
COL6A2P12110 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.96□□□□□ -1.29
COL6A2P12110 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
COL6A2P12110 RAD1P1-201ENST00000231383 813 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 AL080312.1-201ENST00000256654 824 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.96□□□□□ -1.3
COL6A2P12110 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COL6A2P12110 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.96□□□□□ -1.3
COL6A2P12110 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COL6A2P12110 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.96□□□□□ -1.3
COL6A2P12110 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.96□□□□□ -1.3
COL6A2P12110 OR5P4P-201ENST00000424698 917 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.96□□□□□ -1.3
COL6A2P12110 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 ATP5G1P6-201ENST00000451206 412 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC6.96□□□□□ -1.3
COL6A2P12110 BX323845.2-201ENST00000458382 234 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 RN7SL213P-201ENST00000463482 317 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 RPS2P25-201ENST00000467247 580 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.96□□□□□ -1.3
COL6A2P12110 CYCSP20-201ENST00000473154 315 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 AC022336.1-201ENST00000475510 337 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 AC096743.1-201ENST00000485172 319 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 HMGB1P3-201ENST00000502802 616 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 OR5H3P-201ENST00000502817 919 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COL6A2P12110 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.96□□□□□ -1.3
COL6A2P12110 RNU6-319P-201ENST00000516025 108 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.96□□□□□ -1.3
COL6A2P12110 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.96□□□□□ -1.3
COL6A2P12110 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.96□□□□□ -1.3
COL6A2P12110 KCTD9P6-201ENST00000522306 950 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 AC068790.1-201ENST00000536166 355 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.96□□□□□ -1.3
COL6A2P12110 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 AC125611.1-201ENST00000549563 229 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC6.96□□□□□ -1.3
COL6A2P12110 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 AC025918.2-201ENST00000558683 763 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 MTCYBP23-201ENST00000558717 1102 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.96□□□□□ -1.3
COL6A2P12110 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 AC010547.7-201ENST00000570323 333 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 AC096708.2-201ENST00000577676 512 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 MIR5095-201ENST00000578844 88 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 RN7SL42P-201ENST00000579786 294 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 QTRT1P1-201ENST00000604344 1078 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 AC008385.1-201ENST00000604421 355 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 CYCSP1-201ENST00000604815 315 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.96□□□□□ -1.3
COL6A2P12110 AC122108.2-201ENST00000611946 526 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.96□□□□□ -1.3
COL6A2P12110 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.96□□□□□ -1.3
COL6A2P12110 AL049541.2-201ENST00000626377 555 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 AC073488.7-201ENST00000633785 778 ntBASIC6.96□□□□□ -1.3
COL6A2P12110 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COL6A2P12110 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.96□□□□□ -1.3
COL6A2P12110 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.96□□□□□ -1.3
COL6A2P12110 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.96□□□□□ -1.3
COL6A2P12110 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL6A2P12110 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 362 ms