Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7□□□□□ -1.29
UBE4BO95155 RNA5SP418-201ENST00000515951 117 ntBASIC7□□□□□ -1.29
UBE4BO95155 AC135983.3-201ENST00000528049 1226 ntBASIC7□□□□□ -1.29
UBE4BO95155 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7□□□□□ -1.29
UBE4BO95155 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7□□□□□ -1.29
UBE4BO95155 AC024255.1-201ENST00000614376 102 ntBASIC7□□□□□ -1.29
UBE4BO95155 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7□□□□□ -1.29
UBE4BO95155 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
UBE4BO95155 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7□□□□□ -1.29
UBE4BO95155 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7□□□□□ -1.29
UBE4BO95155 AC010401.2-201ENST00000575137 4934 ntBASIC7□□□□□ -1.29
UBE4BO95155 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7□□□□□ -1.29
UBE4BO95155 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
UBE4BO95155 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.99□□□□□ -1.29
UBE4BO95155 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.99□□□□□ -1.29
UBE4BO95155 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.99□□□□□ -1.29
UBE4BO95155 AC011815.2-201ENST00000618230 2021 ntBASIC6.99□□□□□ -1.29
UBE4BO95155 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.99□□□□□ -1.29
UBE4BO95155 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.99□□□□□ -1.29
UBE4BO95155 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.99□□□□□ -1.29
UBE4BO95155 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
UBE4BO95155 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.99□□□□□ -1.29
UBE4BO95155 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.99□□□□□ -1.29
UBE4BO95155 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.99□□□□□ -1.29
UBE4BO95155 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.99□□□□□ -1.29
UBE4BO95155 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.99□□□□□ -1.29
UBE4BO95155 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.99□□□□□ -1.29
UBE4BO95155 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 Z82198.3-201ENST00000421145 199 ntBASIC6.99□□□□□ -1.29
UBE4BO95155 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.99□□□□□ -1.29
UBE4BO95155 GTF3AP6-201ENST00000432585 986 ntBASIC6.99□□□□□ -1.29
UBE4BO95155 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.99□□□□□ -1.29
UBE4BO95155 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.99□□□□□ -1.29
UBE4BO95155 AC064862.5-201ENST00000440618 334 ntBASIC6.99□□□□□ -1.29
UBE4BO95155 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.99□□□□□ -1.29
UBE4BO95155 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.99□□□□□ -1.29
UBE4BO95155 AC092967.1-201ENST00000449016 481 ntBASIC6.99□□□□□ -1.29
UBE4BO95155 RN7SL369P-201ENST00000477138 299 ntBASIC6.99□□□□□ -1.29
UBE4BO95155 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.99□□□□□ -1.29
UBE4BO95155 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
UBE4BO95155 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.99□□□□□ -1.29
UBE4BO95155 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.99□□□□□ -1.29
UBE4BO95155 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.99□□□□□ -1.29
UBE4BO95155 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.99□□□□□ -1.29
UBE4BO95155 RN7SL475P-201ENST00000583379 298 ntBASIC6.99□□□□□ -1.29
UBE4BO95155 PRELID3BP3-201ENST00000584963 545 ntBASIC6.99□□□□□ -1.29
UBE4BO95155 MIR212-201ENST00000586026 110 ntBASIC6.99□□□□□ -1.29
UBE4BO95155 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.99□□□□□ -1.29
UBE4BO95155 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.99□□□□□ -1.29
UBE4BO95155 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
UBE4BO95155 AC092692.1-201ENST00000623625 2595 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.98□□□□□ -1.29
UBE4BO95155 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 LINC01616-201ENST00000561816 2280 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 AC022507.1-201ENST00000548349 1505 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
UBE4BO95155 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 AC006511.3-201ENST00000624929 1783 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 AL033543.1-201ENST00000623440 13454 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.98□□□□□ -1.29
UBE4BO95155 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
UBE4BO95155 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 SNORA64.3-201ENST00000365647 134 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 RNU11-6P-201ENST00000391127 133 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 RNA5SP115-201ENST00000411160 107 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 DHFRP2-201ENST00000414224 547 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.98□□□□□ -1.29
UBE4BO95155 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.98□□□□□ -1.29
UBE4BO95155 AL022237.1-201ENST00000446663 358 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 AC005165.2-201ENST00000466070 380 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
UBE4BO95155 CYCSP25-201ENST00000525280 316 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 AC244034.2-201ENST00000562504 509 ntBASIC6.98□□□□□ -1.29
UBE4BO95155 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
UBE4BO95155 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms