Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC100854.1-201ENST00000520351 341 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC233290.1-201ENST00000553021 1186 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC091304.4-201ENST00000565703 620 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 MIR3189-201ENST00000578735 73 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 OOSP1P2-201ENST00000579644 351 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 BOLA2P1-201ENST00000584794 232 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 AL512413.1-201ENST00000606489 382 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 FAM27E3-202ENST00000614611 340 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC018692.2-201ENST00000624130 348 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 OR7E91P-202ENST00000642062 1198 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AP005435.3-201ENST00000531260 3198 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5□□□□□ -1.61
RBFOX3A6NFN3 TRIM53CP-201ENST00000531490 1354 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC023245.2-201ENST00000530760 2978 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AC239868.2-201ENST00000564237 4527 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 AL022311.1-201ENST00000623726 19416 ntBASIC5□□□□□ -1.61
RBFOX3A6NFN3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AP000473.2-201ENST00000602659 1537 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AC004158.1-201ENST00000564508 4319 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 SNORA30B-201ENST00000365319 129 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 MIR1231-201ENST00000408101 92 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 SETP22-201ENST00000412243 957 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 NFU1P1-201ENST00000413128 774 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AC023141.1-201ENST00000419418 379 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 BX119904.3-201ENST00000428194 957 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AC073410.1-201ENST00000435125 589 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 SNX18P9-201ENST00000440580 835 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 RPL23AP28-201ENST00000448062 470 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 TCEAL4P1-201ENST00000453620 588 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 ENPP7P3-201ENST00000509123 241 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 RNA5SP400-201ENST00000517155 111 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 COX6CP11-201ENST00000555293 229 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 HMGN2P47-201ENST00000559378 272 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 RN7SL25P-201ENST00000583862 260 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AC002069.2-201ENST00000603580 883 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 RN7SL778P-201ENST00000607160 297 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AC018558.4-201ENST00000622153 281 ntBASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.99□□□□□ -1.61
RBFOX3A6NFN3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 SNORA5.1-201ENST00000384275 131 ntBASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 AL158827.1-201ENST00000416300 391 ntBASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 ELOBP4-201ENST00000423418 296 ntBASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 AC007365.2-201ENST00000428806 458 ntBASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 IGLV3-4-201ENST00000432300 244 ntBASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.98□□□□□ -1.61
RBFOX3A6NFN3 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms