Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
USP35Q9P2H5 AC098592.2-201ENST00000413158 265 ntBASIC9.16□□□□□ -0.94
USP35Q9P2H5 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 RPS29P14-201ENST00000431518 171 ntBASIC9.16□□□□□ -0.94
USP35Q9P2H5 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
USP35Q9P2H5 DNAJA1P5-201ENST00000440278 943 ntBASIC9.16□□□□□ -0.94
USP35Q9P2H5 AC089999.1-201ENST00000460336 374 ntBASIC9.16□□□□□ -0.94
USP35Q9P2H5 RN7SL39P-201ENST00000462264 297 ntBASIC9.16□□□□□ -0.94
USP35Q9P2H5 CREM-242ENST00000490511 469 ntTSL 2 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
USP35Q9P2H5 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 IGKV3D-34-201ENST00000522638 302 ntBASIC9.16□□□□□ -0.94
USP35Q9P2H5 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 AL355333.1-201ENST00000605632 279 ntBASIC9.16□□□□□ -0.94
USP35Q9P2H5 AP005131.7-201ENST00000610087 611 ntBASIC9.16□□□□□ -0.94
USP35Q9P2H5 AC020763.5-201ENST00000623298 430 ntBASIC9.16□□□□□ -0.94
USP35Q9P2H5 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
USP35Q9P2H5 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
USP35Q9P2H5 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
USP35Q9P2H5 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
USP35Q9P2H5 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
USP35Q9P2H5 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
USP35Q9P2H5 NAMPTP1-201ENST00000440465 2514 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
USP35Q9P2H5 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
USP35Q9P2H5 AC005261.6-201ENST00000623072 1387 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
USP35Q9P2H5 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
USP35Q9P2H5 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
USP35Q9P2H5 RNA5SP485-201ENST00000365053 119 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
USP35Q9P2H5 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
USP35Q9P2H5 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 RAB9AP5-201ENST00000437794 597 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 RAB9AP2-201ENST00000443911 597 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 RN7SL552P-201ENST00000462094 276 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 RPL5P11-201ENST00000498068 893 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 RGS5-220ENST00000528689 566 ntTSL 5 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 AC140063.1-201ENST00000541343 259 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 AL731537.2-201ENST00000561565 951 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 AL365181.4-201ENST00000609800 547 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 AC008833.1-201ENST00000611633 691 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 AC026124.2-201ENST00000621847 656 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 AC073592.7-201ENST00000623659 507 ntBASIC9.15□□□□□ -0.94
USP35Q9P2H5 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
USP35Q9P2H5 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
USP35Q9P2H5 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC9.15□□□□□ -0.94
USP35Q9P2H5 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
USP35Q9P2H5 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
USP35Q9P2H5 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC9.15□□□□□ -0.95
USP35Q9P2H5 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC9.15□□□□□ -0.95
USP35Q9P2H5 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
USP35Q9P2H5 AC093909.5-201ENST00000621839 1799 ntBASIC9.14□□□□□ -0.95
USP35Q9P2H5 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC9.14□□□□□ -0.95
USP35Q9P2H5 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
USP35Q9P2H5 AC112243.1-201ENST00000623949 3851 ntBASIC9.14□□□□□ -0.95
USP35Q9P2H5 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
USP35Q9P2H5 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
USP35Q9P2H5 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
USP35Q9P2H5 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC9.14□□□□□ -0.95
USP35Q9P2H5 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
USP35Q9P2H5 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
USP35Q9P2H5 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC9.14□□□□□ -0.95
USP35Q9P2H5 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
USP35Q9P2H5 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
USP35Q9P2H5 RNU6-697P-201ENST00000363348 107 ntBASIC9.14□□□□□ -0.95
USP35Q9P2H5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
USP35Q9P2H5 UBBP1-201ENST00000392399 473 ntBASIC9.14□□□□□ -0.95
USP35Q9P2H5 AC007068.1-201ENST00000396690 844 ntBASIC9.14□□□□□ -0.95
USP35Q9P2H5 NPM1P38-201ENST00000403835 865 ntBASIC9.14□□□□□ -0.95
USP35Q9P2H5 RPA3-204ENST00000406109 434 ntTSL 3 BASIC9.14□□□□□ -0.95
USP35Q9P2H5 PSMC1P2-201ENST00000423961 1204 ntBASIC9.14□□□□□ -0.95
USP35Q9P2H5 AL590623.1-201ENST00000427864 105 ntBASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms