Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 OR51A6P-201ENST00000418680 1004 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC009362.1-201ENST00000427253 406 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 DBIL5P2-201ENST00000443827 253 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 SUMO2P1-206ENST00000445436 284 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 RPLP0P1-201ENST00000457002 361 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC091982.1-202ENST00000473923 343 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC108729.2-201ENST00000476543 840 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 RPL23AP80-201ENST00000495605 424 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 H3F3AP3-201ENST00000497682 407 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 UBE2V1P12-201ENST00000503954 474 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 RPEP1-201ENST00000504507 658 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 KCTD9P4-201ENST00000526766 1166 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC016590.3-201ENST00000611171 753 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC005899.6-201ENST00000620729 297 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 MIR6813-201ENST00000621638 56 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AP003108.4-201ENST00000623917 878 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AL731556.1-201ENST00000394628 3711 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC073365.1-203ENST00000641055 1992 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 OR4G1P-202ENST00000641173 1788 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 LINC01616-201ENST00000561816 2280 ntBASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
AMBRA1Q9C0C7 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 MTCO1P4-201ENST00000520516 1409 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 MIR551B-201ENST00000384984 96 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 RN7SKP148-201ENST00000410179 275 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 RPS3AP25-201ENST00000411660 793 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AC013268.2-201ENST00000420753 337 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 UBE2D3P3-201ENST00000426992 425 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 MRPL50P1-201ENST00000431951 384 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 MTND2P2-201ENST00000434633 945 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 CLNS1AP1-201ENST00000435954 682 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 HMGN1P5-201ENST00000448591 263 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AC010878.1-201ENST00000456500 1047 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AC083806.1-201ENST00000468934 316 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 RN7SL267P-201ENST00000485107 261 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 RNA5SP116-201ENST00000516132 98 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 KATNBL1P5-201ENST00000605015 517 ntBASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
AMBRA1Q9C0C7 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms