Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CDY19P-201ENST00000411668 1613 ntBASIC5.65□□□□□ -1.51
SSX3Q99909 CDY18P-201ENST00000438294 1609 ntBASIC5.65□□□□□ -1.51
SSX3Q99909 ASNSP6-201ENST00000592770 1618 ntBASIC5.65□□□□□ -1.51
SSX3Q99909 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SSX3Q99909 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.65□□□□□ -1.51
SSX3Q99909 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSX3Q99909 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.65□□□□□ -1.51
SSX3Q99909 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SSX3Q99909 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSX3Q99909 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SSX3Q99909 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSX3Q99909 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSX3Q99909 AC125336.1-201ENST00000508893 2827 ntBASIC5.65□□□□□ -1.51
SSX3Q99909 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
SSX3Q99909 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.65□□□□□ -1.51
SSX3Q99909 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SSX3Q99909 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.65□□□□□ -1.51
SSX3Q99909 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.65□□□□□ -1.51
SSX3Q99909 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX3Q99909 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 TPTE2P2-201ENST00000403471 1466 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 AC022905.1-201ENST00000503430 3048 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.64□□□□□ -1.51
SSX3Q99909 CDC27P2-201ENST00000425026 1922 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SSX3Q99909 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SSX3Q99909 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX3Q99909 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SSX3Q99909 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SSX3Q99909 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSX3Q99909 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX3Q99909 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX3Q99909 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX3Q99909 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX3Q99909 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX3Q99909 AL845321.1-201ENST00000444603 348 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX3Q99909 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 AC010878.1-201ENST00000456500 1047 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 AC091544.1-201ENST00000484702 348 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 AP000926.3-201ENST00000497201 299 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 AC091917.2-201ENST00000505002 744 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC5.64□□□□□ -1.51
SSX3Q99909 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX3Q99909 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX3Q99909 HNRNPCP1-201ENST00000556181 766 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 EIF4A3P1-201ENST00000578499 647 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.64□□□□□ -1.51
SSX3Q99909 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 AC025171.4-201ENST00000607250 1047 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 AP005212.4-201ENST00000614206 710 ntBASIC5.64□□□□□ -1.51
SSX3Q99909 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSX3Q99909 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
SSX3Q99909 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SSX3Q99909 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX3Q99909 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.64□□□□□ -1.51
SSX3Q99909 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX3Q99909 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SSX3Q99909 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX3Q99909 TATDN2P3-201ENST00000452855 3665 ntBASIC5.63□□□□□ -1.51
SSX3Q99909 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX3Q99909 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX3Q99909 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms