Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC125232.1-201ENST00000452554 1408 ntBASIC6.23□□□□□ -1.41
SNX18Q96RF0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.23□□□□□ -1.41
SNX18Q96RF0 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SNX18Q96RF0 AL592429.1-201ENST00000403909 1473 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX18Q96RF0 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX18Q96RF0 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX18Q96RF0 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX18Q96RF0 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX18Q96RF0 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 RN7SKP137-201ENST00000411074 307 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 RPSAP60-201ENST00000415403 880 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AL713922.1-201ENST00000416477 747 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 PPIAP23-201ENST00000420099 497 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC009963.4-201ENST00000448535 339 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC019080.2-201ENST00000453859 394 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 LDHBP2-201ENST00000456969 1005 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC117395.1-201ENST00000487390 403 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC027338.1-201ENST00000514840 825 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 OR7E10P-201ENST00000526420 991 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 AP000662.1-201ENST00000530952 487 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 HNRNPCP1-201ENST00000556181 766 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC090971.3-201ENST00000557871 1041 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC106785.3-201ENST00000564064 847 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC068408.1-201ENST00000577406 1144 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 FAM60CP-201ENST00000591086 664 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.22□□□□□ -1.41
SNX18Q96RF0 VN1R81P-201ENST00000602085 372 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 ABI1P1-201ENST00000603375 1120 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC091193.1-201ENST00000604640 448 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC120053.1-201ENST00000607706 736 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AL050303.3-201ENST00000613704 284 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AL591848.4-201ENST00000567832 3472 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX18Q96RF0 AC010168.2-201ENST00000562691 5428 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 AL627171.1-201ENST00000618845 1308 ntBASIC6.22□□□□□ -1.41
SNX18Q96RF0 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SNX18Q96RF0 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SNX18Q96RF0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.21□□□□□ -1.41
SNX18Q96RF0 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.21□□□□□ -1.41
SNX18Q96RF0 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNX18Q96RF0 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNX18Q96RF0 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNX18Q96RF0 RNU4-39P-201ENST00000362455 127 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 SNORA27.3-201ENST00000364937 134 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNX18Q96RF0 RPS3AP5-201ENST00000389400 821 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 RNU11-6P-201ENST00000391127 133 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 FAUP2-201ENST00000394301 401 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AP003170.5-201ENST00000397185 335 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AL451046.1-201ENST00000406097 534 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 ZNF37CP-201ENST00000406795 241 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 CHCHD3P1-201ENST00000425516 676 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 AL592114.2-201ENST00000440142 532 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 RPS10P14-201ENST00000440748 502 ntBASIC6.21□□□□□ -1.42
SNX18Q96RF0 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.21□□□□□ -1.42
SNX18Q96RF0 RPS7P4-201ENST00000444127 582 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms