Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 EIF4E2P2-201ENST00000492033 736 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 SNRPCP11-201ENST00000492453 205 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC138207.8-204ENST00000579588 527 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AL359704.2-201ENST00000604335 521 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AL590032.1-201ENST00000604920 252 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 KATNBL1P1-201ENST00000605192 748 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AL513218.1-201ENST00000606527 391 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC015819.1-201ENST00000613588 663 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 AC103798.2-201ENST00000624292 632 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 SNORA16A-202ENST00000628458 135 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 ZNF806-201ENST00000438300 1774 ntBASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CHMP4CQ96CF2 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 RNA5SP188-201ENST00000362916 129 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 RNA5SP350-201ENST00000363298 111 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AL359694.1-201ENST00000403247 604 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AHCYP8-201ENST00000425108 209 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AL139156.3-201ENST00000454802 394 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AC007068.2-201ENST00000543168 395 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 MIR212-201ENST00000586026 110 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 RPL29P33-201ENST00000587474 316 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AL683813.2-201ENST00000605245 502 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AC003001.2-201ENST00000616294 831 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 MIR6503-201ENST00000622884 86 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 UGT2B27P-201ENST00000505092 1620 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 AP002370.1-201ENST00000528055 1602 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 TTC41P-205ENST00000551270 3963 ntBASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.95□□□□□ -1.14
CHMP4CQ96CF2 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC013488.1-201ENST00000526618 1838 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 OR2M1P-201ENST00000318104 951 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AL033519.1-201ENST00000407266 307 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 RPLP1P10-201ENST00000413972 339 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC013268.2-201ENST00000420753 337 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 PAICSP2-201ENST00000429118 1150 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 MAPRE1P3-201ENST00000435438 796 ntBASIC7.94□□□□□ -1.14
CHMP4CQ96CF2 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms