Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 MIR551B-201ENST00000384984 96 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AL451046.1-201ENST00000406097 534 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 HMGA1P8-201ENST00000414130 321 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 FAM183DP-201ENST00000421987 399 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 OSTCP4-201ENST00000424397 449 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AL354707.3-201ENST00000427308 331 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AC016908.1-201ENST00000442571 1219 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AL133351.3-201ENST00000454998 193 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AC099670.1-201ENST00000455141 783 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 RANP2-201ENST00000456833 229 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 RN7SL104P-201ENST00000498686 293 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 OR6M2P-201ENST00000529831 871 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AC015819.1-201ENST00000613588 663 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 AC018659.2-201ENST00000624690 715 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 OR7A1P-202ENST00000641542 1158 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LMO3Q8TAP4 HSPD1P8-201ENST00000400121 1658 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 LINC01613-201ENST00000561476 2780 ntBASIC6.74□□□□□ -1.33
LMO3Q8TAP4 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC123912.3-201ENST00000600907 1367 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 RPL11P4-201ENST00000332269 436 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 RNU1-49P-201ENST00000363468 159 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 RNA5SP485-201ENST00000365053 119 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 MTND2P12-201ENST00000417560 1252 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 LINC00328-2P-201ENST00000436585 219 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC073476.1-201ENST00000452854 407 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 CEACAMP11-201ENST00000455211 583 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC073594.1-201ENST00000462065 364 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC117500.1-201ENST00000497352 755 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 HMGN1P16-201ENST00000508308 283 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 CYCSP25-201ENST00000525280 316 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC036111.2-201ENST00000533247 901 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 DYNLL1P1-201ENST00000595442 269 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 WBP1LP12-201ENST00000604449 331 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC079414.3-201ENST00000612986 1090 ntBASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
LMO3Q8TAP4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms