Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AL136100.1-201ENST00000407696 330 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 OSTCP2-201ENST00000437956 444 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC236972.4-201ENST00000458091 963 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 OR4A40P-201ENST00000533878 948 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC007066.2-202ENST00000566531 914 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC016252.1-201ENST00000609721 474 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 FRG2MP-201ENST00000613317 856 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC069542.2-201ENST00000624816 216 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC022726.2-201ENST00000634673 547 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AC092692.1-201ENST00000623625 2595 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 UGT2B24P-201ENST00000514441 1597 ntBASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC71LQ8N9Z2 AL592429.1-201ENST00000403909 1473 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AOX3P-204ENST00000491025 2107 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 FDPSP6-201ENST00000425091 512 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 MGAT2P2-201ENST00000427194 797 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC016027.5-201ENST00000427227 210 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 GAPDHP20-201ENST00000444107 1007 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 MED28P7-201ENST00000456611 530 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AL445687.2-201ENST00000458156 728 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 NDUFB4P1-201ENST00000462398 381 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 BMS1P16-201ENST00000556075 1147 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC009120.3-201ENST00000563335 499 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 MIR5705-201ENST00000579870 89 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 MIR1273F-201ENST00000580581 99 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AP001267.4-201ENST00000602598 545 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC104117.5-201ENST00000606195 547 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 MIR7854-201ENST00000620068 65 ntBASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC71LQ8N9Z2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms