Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC025262.3-201ENST00000623666 360 ntBASIC7.65□□□□□ -1.18
PDS5AQ29RF7 AP003175.1-201ENST00000641383 6658 ntBASIC7.65□□□□□ -1.18
PDS5AQ29RF7 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PDS5AQ29RF7 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PDS5AQ29RF7 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.65□□□□□ -1.19
PDS5AQ29RF7 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
PDS5AQ29RF7 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
PDS5AQ29RF7 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
PDS5AQ29RF7 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
PDS5AQ29RF7 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PDS5AQ29RF7 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.65□□□□□ -1.19
PDS5AQ29RF7 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.65□□□□□ -1.19
PDS5AQ29RF7 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 CYP2G2P-201ENST00000594920 1485 ntBASIC7.64□□□□□ -1.19
PDS5AQ29RF7 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 AC105235.1-201ENST00000623208 1816 ntBASIC7.64□□□□□ -1.19
PDS5AQ29RF7 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 HSPD1P9-201ENST00000420325 1636 ntBASIC7.64□□□□□ -1.19
PDS5AQ29RF7 AP002370.1-201ENST00000528055 1602 ntBASIC7.64□□□□□ -1.19
PDS5AQ29RF7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 RPS10P18-201ENST00000442662 495 ntBASIC7.64□□□□□ -1.19
PDS5AQ29RF7 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 SNX18P26-201ENST00000458433 740 ntBASIC7.64□□□□□ -1.19
PDS5AQ29RF7 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 SNX18P24-201ENST00000505249 671 ntBASIC7.64□□□□□ -1.19
PDS5AQ29RF7 AC010343.2-201ENST00000510162 224 ntBASIC7.64□□□□□ -1.19
PDS5AQ29RF7 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.64□□□□□ -1.19
PDS5AQ29RF7 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC241584.2-201ENST00000637142 2090 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AL133243.2-201ENST00000610331 1621 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 HSPD1P4-201ENST00000547203 1702 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 SNORA51.9-201ENST00000384295 124 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC079807.1-201ENST00000429993 481 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 HMGN1P2-201ENST00000445197 310 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 VN1R38P-201ENST00000450265 887 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC009120.3-201ENST00000563335 499 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC079315.1-201ENST00000602952 623 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC108865.2-201ENST00000606881 432 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 FAM27E2-201ENST00000619668 403 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AL731556.1-201ENST00000394628 3711 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 AC027575.3-201ENST00000583058 2747 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.63□□□□□ -1.19
PDS5AQ29RF7 UGT2B27P-201ENST00000505092 1620 ntBASIC7.63□□□□□ -1.19
PDS5AQ29RF7 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.62□□□□□ -1.19
PDS5AQ29RF7 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PDS5AQ29RF7 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
PDS5AQ29RF7 AC061975.7-201ENST00000592016 2692 ntBASIC7.62□□□□□ -1.19
PDS5AQ29RF7 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.62□□□□□ -1.19
PDS5AQ29RF7 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.62□□□□□ -1.19
PDS5AQ29RF7 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms