Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC8.79□□□□□ -1
PTCH1Q13635 AC007394.1-201ENST00000421941 531 ntBASIC8.79□□□□□ -1
PTCH1Q13635 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC8.79□□□□□ -1
PTCH1Q13635 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.79□□□□□ -1
PTCH1Q13635 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 SUMO2P10-201ENST00000452006 288 ntBASIC8.79□□□□□ -1
PTCH1Q13635 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.79□□□□□ -1
PTCH1Q13635 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC8.79□□□□□ -1
PTCH1Q13635 AC079600.1-201ENST00000550326 297 ntBASIC8.79□□□□□ -1
PTCH1Q13635 AC010547.6-201ENST00000571789 193 ntBASIC8.79□□□□□ -1
PTCH1Q13635 SNORD95-201ENST00000579879 68 ntBASIC8.79□□□□□ -1
PTCH1Q13635 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC8.79□□□□□ -1
PTCH1Q13635 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
PTCH1Q13635 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTCH1Q13635 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.78□□□□□ -1
PTCH1Q13635 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTCH1Q13635 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.78□□□□□ -1
PTCH1Q13635 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTCH1Q13635 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PTCH1Q13635 AL139384.2-201ENST00000613809 3590 ntBASIC8.78□□□□□ -1
PTCH1Q13635 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
PTCH1Q13635 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
PTCH1Q13635 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTCH1Q13635 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTCH1Q13635 CUBNP3-201ENST00000457461 1784 ntBASIC8.78□□□□□ -1
PTCH1Q13635 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.78□□□□□ -1
PTCH1Q13635 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTCH1Q13635 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC8.78□□□□□ -1
PTCH1Q13635 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
PTCH1Q13635 AC010624.4-201ENST00000597606 1351 ntBASIC8.78□□□□□ -1
PTCH1Q13635 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTCH1Q13635 AL132875.1-201ENST00000403623 949 ntBASIC8.78□□□□□ -1
PTCH1Q13635 AC245096.1-201ENST00000413104 546 ntBASIC8.78□□□□□ -1
PTCH1Q13635 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC8.78□□□□□ -1
PTCH1Q13635 NIPA2P1-201ENST00000426223 976 ntBASIC8.78□□□□□ -1
PTCH1Q13635 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC8.78□□□□□ -1
PTCH1Q13635 AL512637.1-201ENST00000439523 1231 ntBASIC8.78□□□□□ -1
PTCH1Q13635 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.78□□□□□ -1
PTCH1Q13635 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.78□□□□□ -1
PTCH1Q13635 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.78□□□□□ -1
PTCH1Q13635 AC108043.1-201ENST00000512696 574 ntBASIC8.78□□□□□ -1
PTCH1Q13635 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC8.78□□□□□ -1
PTCH1Q13635 TMEM97P2-201ENST00000517841 403 ntBASIC8.78□□□□□ -1
PTCH1Q13635 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC8.78□□□□□ -1
PTCH1Q13635 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC8.78□□□□□ -1
PTCH1Q13635 IGLV3-6-201ENST00000523937 250 ntBASIC8.78□□□□□ -1
PTCH1Q13635 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.78□□□□□ -1
PTCH1Q13635 COX6CP7-201ENST00000597056 208 ntBASIC8.78□□□□□ -1
PTCH1Q13635 AL953862.2-201ENST00000603089 820 ntBASIC8.78□□□□□ -1
PTCH1Q13635 AC211433.2-201ENST00000608433 387 ntBASIC8.78□□□□□ -1
PTCH1Q13635 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
PTCH1Q13635 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTCH1Q13635 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.78□□□□□ -1
PTCH1Q13635 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.77□□□□□ -1
PTCH1Q13635 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.77□□□□□ -1
PTCH1Q13635 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
PTCH1Q13635 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
PTCH1Q13635 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC8.77□□□□□ -1.01
PTCH1Q13635 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
PTCH1Q13635 AC024651.2-201ENST00000562480 2098 ntBASIC8.77□□□□□ -1.01
PTCH1Q13635 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 RNU1-134P-201ENST00000362935 165 ntBASIC8.77□□□□□ -1.01
PTCH1Q13635 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 U3.43-201ENST00000410734 213 ntBASIC8.77□□□□□ -1.01
PTCH1Q13635 EEF1B2P8-201ENST00000414101 671 ntBASIC8.77□□□□□ -1.01
PTCH1Q13635 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC8.77□□□□□ -1.01
PTCH1Q13635 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC8.77□□□□□ -1.01
PTCH1Q13635 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC8.77□□□□□ -1.01
PTCH1Q13635 AC016908.1-201ENST00000442571 1219 ntBASIC8.77□□□□□ -1.01
PTCH1Q13635 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC8.77□□□□□ -1.01
PTCH1Q13635 GEMIN2P1-201ENST00000454246 752 ntBASIC8.77□□□□□ -1.01
PTCH1Q13635 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC8.77□□□□□ -1.01
PTCH1Q13635 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC8.77□□□□□ -1.01
PTCH1Q13635 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC8.77□□□□□ -1.01
PTCH1Q13635 ZNF322P1-201ENST00000568013 1209 ntBASIC8.77□□□□□ -1.01
PTCH1Q13635 AL008723.3-201ENST00000608926 449 ntBASIC8.77□□□□□ -1.01
PTCH1Q13635 AC018445.2-201ENST00000622987 260 ntBASIC8.77□□□□□ -1.01
PTCH1Q13635 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC8.77□□□□□ -1.01
PTCH1Q13635 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 FGG-205ENST00000407946 1636 ntTSL 5 BASIC8.77□□□□□ -1.01
PTCH1Q13635 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
PTCH1Q13635 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PTCH1Q13635 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
PTCH1Q13635 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PTCH1Q13635 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PTCH1Q13635 AF287957.1-201ENST00000607368 1595 ntBASIC8.76□□□□□ -1.01
PTCH1Q13635 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PTCH1Q13635 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PTCH1Q13635 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms