Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.37□□□□□ -1.55
CX3CL1P78423 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 NEK2P4-201ENST00000425793 1329 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 AL512310.3-201ENST00000547023 1335 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.37□□□□□ -1.55
CX3CL1P78423 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.37□□□□□ -1.55
CX3CL1P78423 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 AC096992.2-201ENST00000609553 1684 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CL1P78423 AC126474.2-201ENST00000623268 1750 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CX3CL1P78423 RACGAP1P-201ENST00000550663 1879 ntBASIC5.37□□□□□ -1.55
CX3CL1P78423 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC5.36□□□□□ -1.55
CX3CL1P78423 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CL1P78423 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.36□□□□□ -1.55
CX3CL1P78423 PARP4P1-201ENST00000435945 2337 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CX3CL1P78423 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CX3CL1P78423 RPL24P4-201ENST00000326586 421 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CX3CL1P78423 OR11H13P-201ENST00000359695 979 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 RN7SKP130-201ENST00000364924 301 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 SNORA70.3-201ENST00000365075 132 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 RNU1-55P-201ENST00000365510 158 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CL1P78423 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CX3CL1P78423 LDHAP5-201ENST00000394996 622 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 MEAF6P1-201ENST00000416092 327 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC009303.1-201ENST00000426307 352 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 RPS10P21-201ENST00000430654 475 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AL590128.1-201ENST00000433407 286 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AC245452.2-201ENST00000435222 392 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AL606490.8-201ENST00000441624 319 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AL845321.1-201ENST00000444603 348 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 SLAMF6P1-201ENST00000451067 602 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AL354872.1-201ENST00000456361 967 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CL1P78423 UOX-201ENST00000471089 899 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AC117395.1-201ENST00000487390 403 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CL1P78423 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 SNRPCP6-201ENST00000528310 210 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC012414.2-201ENST00000559474 187 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AC010287.1-201ENST00000566916 357 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 MIR4312-201ENST00000579909 76 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.36□□□□□ -1.55
CX3CL1P78423 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.36□□□□□ -1.55
CX3CL1P78423 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CL1P78423 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AC026367.3-201ENST00000619032 590 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AC018659.2-201ENST00000624690 715 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.36□□□□□ -1.55
CX3CL1P78423 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CX3CL1P78423 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.36□□□□□ -1.55
CX3CL1P78423 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CL1P78423 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.36□□□□□ -1.55
CX3CL1P78423 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CX3CL1P78423 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CX3CL1P78423 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CX3CL1P78423 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CX3CL1P78423 AKAP17BP-201ENST00000431706 2719 ntBASIC5.36□□□□□ -1.55
CX3CL1P78423 AC020658.2-201ENST00000559030 4020 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms