Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.09□□□□□ -1.43
COL5A1P20908 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.09□□□□□ -1.43
COL5A1P20908 AL133243.4-201ENST00000623116 3109 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 AC123769.1-201ENST00000530992 3192 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
COL5A1P20908 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL5A1P20908 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COL5A1P20908 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL5A1P20908 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.09□□□□□ -1.44
COL5A1P20908 GAPDHP75-201ENST00000433910 943 ntBASIC6.09□□□□□ -1.44
COL5A1P20908 AL355355.1-201ENST00000442900 793 ntBASIC6.09□□□□□ -1.44
COL5A1P20908 AP000281.1-201ENST00000444036 316 ntBASIC6.09□□□□□ -1.44
COL5A1P20908 HMGN1P36-201ENST00000446623 298 ntBASIC6.09□□□□□ -1.44
COL5A1P20908 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COL5A1P20908 UBFD1P1-201ENST00000473259 814 ntBASIC6.09□□□□□ -1.44
COL5A1P20908 AC092824.1-201ENST00000483524 576 ntBASIC6.09□□□□□ -1.44
COL5A1P20908 RN7SL561P-201ENST00000488553 281 ntBASIC6.09□□□□□ -1.44
COL5A1P20908 AC090958.1-201ENST00000511122 351 ntBASIC6.09□□□□□ -1.44
COL5A1P20908 OR5H7P-201ENST00000514084 930 ntBASIC6.09□□□□□ -1.44
COL5A1P20908 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.09□□□□□ -1.44
COL5A1P20908 AC084337.1-201ENST00000524809 686 ntBASIC6.09□□□□□ -1.44
COL5A1P20908 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.09□□□□□ -1.44
COL5A1P20908 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A1P20908 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.08□□□□□ -1.44
COL5A1P20908 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
COL5A1P20908 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A1P20908 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.08□□□□□ -1.44
COL5A1P20908 AC092725.2-201ENST00000567658 1389 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.08□□□□□ -1.44
COL5A1P20908 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A1P20908 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A1P20908 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.08□□□□□ -1.44
COL5A1P20908 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A1P20908 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.08□□□□□ -1.44
COL5A1P20908 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A1P20908 SNORA21-201ENST00000362423 132 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 RNA5SP443-201ENST00000363083 132 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 RNU1-46P-201ENST00000384425 164 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 MIR1203-201ENST00000408812 85 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 MGAT2P1-201ENST00000449718 797 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 AL445665.1-202ENST00000452436 324 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 RN7SL717P-201ENST00000478343 297 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.08□□□□□ -1.44
COL5A1P20908 AC106800.3-201ENST00000511389 308 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.08□□□□□ -1.44
COL5A1P20908 AC023245.2-201ENST00000530760 2978 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A1P20908 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.08□□□□□ -1.44
COL5A1P20908 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL5A1P20908 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.08□□□□□ -1.44
COL5A1P20908 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.08□□□□□ -1.44
COL5A1P20908 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.08□□□□□ -1.44
COL5A1P20908 AC108673.3-201ENST00000609183 335 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 RNA5SP440-201ENST00000612665 119 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A1P20908 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.08□□□□□ -1.44
COL5A1P20908 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A1P20908 AC013488.1-201ENST00000526618 1838 ntBASIC6.08□□□□□ -1.44
COL5A1P20908 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A1P20908 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL5A1P20908 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
COL5A1P20908 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
COL5A1P20908 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL5A1P20908 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COL5A1P20908 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.07□□□□□ -1.44
COL5A1P20908 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL5A1P20908 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL5A1P20908 RNU1-49P-201ENST00000363468 159 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.07□□□□□ -1.44
COL5A1P20908 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.07□□□□□ -1.44
COL5A1P20908 AC007394.1-201ENST00000421941 531 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 AC023141.3-201ENST00000436698 278 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 AC026254.2-201ENST00000475295 371 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 AC092865.4-201ENST00000477936 615 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 RPL34P33-201ENST00000486062 334 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 PSMA2P2-201ENST00000504319 686 ntBASIC6.07□□□□□ -1.44
COL5A1P20908 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.07□□□□□ -1.44
COL5A1P20908 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.07□□□□□ -1.44
COL5A1P20908 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.07□□□□□ -1.44
COL5A1P20908 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.07□□□□□ -1.44
COL5A1P20908 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.07□□□□□ -1.44
COL5A1P20908 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.07□□□□□ -1.44
COL5A1P20908 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.07□□□□□ -1.44
COL5A1P20908 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms