Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.68□□□□□ -1.34
RETP07949 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RETP07949 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.68□□□□□ -1.34
RETP07949 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 PSMC1P4-201ENST00000515236 1327 ntBASIC6.68□□□□□ -1.34
RETP07949 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 BX284613.1-201ENST00000452221 1641 ntBASIC6.68□□□□□ -1.34
RETP07949 UGT2B27P-201ENST00000505092 1620 ntBASIC6.68□□□□□ -1.34
RETP07949 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.68□□□□□ -1.34
RETP07949 FO082842.1-201ENST00000423552 1370 ntBASIC6.68□□□□□ -1.34
RETP07949 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.68□□□□□ -1.34
RETP07949 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RETP07949 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.67□□□□□ -1.34
RETP07949 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.67□□□□□ -1.34
RETP07949 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
RETP07949 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.67□□□□□ -1.34
RETP07949 MTND6P1-201ENST00000417434 424 ntBASIC6.67□□□□□ -1.34
RETP07949 PAICSP2-201ENST00000429118 1150 ntBASIC6.67□□□□□ -1.34
RETP07949 GTF3AP6-201ENST00000432585 986 ntBASIC6.67□□□□□ -1.34
RETP07949 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.67□□□□□ -1.34
RETP07949 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.67□□□□□ -1.34
RETP07949 AC002075.1-201ENST00000457396 676 ntBASIC6.67□□□□□ -1.34
RETP07949 AC068228.1-201ENST00000461723 211 ntBASIC6.67□□□□□ -1.34
RETP07949 AC135721.2-201ENST00000464237 300 ntBASIC6.67□□□□□ -1.34
RETP07949 RPL7AP23-201ENST00000482625 776 ntBASIC6.67□□□□□ -1.34
RETP07949 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.67□□□□□ -1.34
RETP07949 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 MTATP6P1-201ENST00000514057 681 ntBASIC6.67□□□□□ -1.34
RETP07949 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.67□□□□□ -1.34
RETP07949 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.67□□□□□ -1.34
RETP07949 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.67□□□□□ -1.34
RETP07949 AC026956.1-201ENST00000558741 396 ntBASIC6.67□□□□□ -1.34
RETP07949 AC005632.2-201ENST00000564271 828 ntBASIC6.67□□□□□ -1.34
RETP07949 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.67□□□□□ -1.34
RETP07949 MIR6768-201ENST00000610734 72 ntBASIC6.67□□□□□ -1.34
RETP07949 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.67□□□□□ -1.34
RETP07949 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.67□□□□□ -1.34
RETP07949 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.67□□□□□ -1.34
RETP07949 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.67□□□□□ -1.34
RETP07949 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
RETP07949 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.67□□□□□ -1.34
RETP07949 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RETP07949 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RETP07949 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.66□□□□□ -1.34
RETP07949 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RETP07949 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.66□□□□□ -1.34
RETP07949 MAPK10-261ENST00000641050 3109 ntBASIC6.66□□□□□ -1.34
RETP07949 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RETP07949 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.66□□□□□ -1.34
RETP07949 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RETP07949 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.66□□□□□ -1.34
RETP07949 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RETP07949 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RETP07949 RPL11P4-201ENST00000332269 436 ntBASIC6.66□□□□□ -1.34
RETP07949 RNU1-84P-201ENST00000365447 164 ntBASIC6.66□□□□□ -1.34
RETP07949 SNORA17A-201ENST00000391185 133 ntBASIC6.66□□□□□ -1.34
RETP07949 MIR541-201ENST00000401360 84 ntBASIC6.66□□□□□ -1.34
RETP07949 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.66□□□□□ -1.34
RETP07949 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RETP07949 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RETP07949 RPL12P12-201ENST00000424633 501 ntBASIC6.66□□□□□ -1.34
RETP07949 AL354707.3-201ENST00000427308 331 ntBASIC6.66□□□□□ -1.34
RETP07949 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.66□□□□□ -1.34
RETP07949 AL020997.1-201ENST00000446554 349 ntBASIC6.66□□□□□ -1.34
RETP07949 RPL26P30-201ENST00000453533 435 ntBASIC6.66□□□□□ -1.34
RETP07949 RN7SL177P-201ENST00000476596 299 ntBASIC6.66□□□□□ -1.34
RETP07949 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.66□□□□□ -1.34
RETP07949 HMGN1P17-201ENST00000513734 295 ntBASIC6.66□□□□□ -1.34
RETP07949 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.66□□□□□ -1.34
RETP07949 TRIM77BP-201ENST00000524985 1119 ntBASIC6.66□□□□□ -1.34
RETP07949 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.66□□□□□ -1.34
RETP07949 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.66□□□□□ -1.34
RETP07949 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RETP07949 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.66□□□□□ -1.34
RETP07949 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.66□□□□□ -1.34
RETP07949 AC093635.1-201ENST00000609028 555 ntBASIC6.66□□□□□ -1.34
RETP07949 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.66□□□□□ -1.34
RETP07949 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
RETP07949 AC131009.3-201ENST00000621809 287 ntBASIC6.66□□□□□ -1.34
RETP07949 SNORA17.5-201ENST00000630429 132 ntBASIC6.66□□□□□ -1.34
RETP07949 AC005034.3-201ENST00000604845 1747 ntBASIC6.66□□□□□ -1.34
RETP07949 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms