Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.9□□□□□ -1.46
P04436 AC008055.1-201ENST00000547032 609 ntBASIC5.9□□□□□ -1.46
P04436 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.9□□□□□ -1.46
P04436 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.9□□□□□ -1.46
P04436 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.9□□□□□ -1.46
P04436 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.9□□□□□ -1.46
P04436 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.9□□□□□ -1.46
P04436 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.9□□□□□ -1.46
P04436 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.9□□□□□ -1.46
P04436 AC073862.4-201ENST00000622982 854 ntBASIC5.9□□□□□ -1.46
P04436 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.9□□□□□ -1.46
P04436 AL121936.2-201ENST00000641935 662 ntBASIC5.9□□□□□ -1.46
P04436 AC009120.2-204ENST00000621548 2032 ntBASIC5.9□□□□□ -1.47
P04436 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
P04436 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
P04436 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
P04436 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
P04436 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
P04436 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
P04436 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.9□□□□□ -1.47
P04436 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
P04436 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
P04436 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.9□□□□□ -1.47
P04436 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.47
P04436 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
P04436 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
P04436 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
P04436 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
P04436 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.89□□□□□ -1.47
P04436 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.89□□□□□ -1.47
P04436 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
P04436 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
P04436 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
P04436 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
P04436 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 AC107977.1-201ENST00000355745 939 ntBASIC5.89□□□□□ -1.47
P04436 RNA5SP188-201ENST00000362916 129 ntBASIC5.89□□□□□ -1.47
P04436 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 AL023284.3-201ENST00000407767 334 ntBASIC5.89□□□□□ -1.47
P04436 RPL21P50-201ENST00000417698 477 ntBASIC5.89□□□□□ -1.47
P04436 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.89□□□□□ -1.47
P04436 MED28P4-201ENST00000433137 572 ntBASIC5.89□□□□□ -1.47
P04436 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.89□□□□□ -1.47
P04436 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.89□□□□□ -1.47
P04436 POU5F1P5-201ENST00000445059 658 ntBASIC5.89□□□□□ -1.47
P04436 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 RN7SL362P-201ENST00000494228 267 ntBASIC5.89□□□□□ -1.47
P04436 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.89□□□□□ -1.47
P04436 AC112484.3-201ENST00000505910 329 ntBASIC5.89□□□□□ -1.47
P04436 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.89□□□□□ -1.47
P04436 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC5.89□□□□□ -1.47
P04436 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.89□□□□□ -1.47
P04436 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.89□□□□□ -1.47
P04436 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.89□□□□□ -1.47
P04436 NPIPB14P-203ENST00000532298 987 ntBASIC5.89□□□□□ -1.47
P04436 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.89□□□□□ -1.47
P04436 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.89□□□□□ -1.47
P04436 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.89□□□□□ -1.47
P04436 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.89□□□□□ -1.47
P04436 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.89□□□□□ -1.47
P04436 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.89□□□□□ -1.47
P04436 AP001052.1-201ENST00000626421 99 ntBASIC5.89□□□□□ -1.47
P04436 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.89□□□□□ -1.47
P04436 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.89□□□□□ -1.47
P04436 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
P04436 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.89□□□□□ -1.47
P04436 AL359976.1-201ENST00000418655 3528 ntBASIC5.89□□□□□ -1.47
P04436 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC5.89□□□□□ -1.47
P04436 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.89□□□□□ -1.47
P04436 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
P04436 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
P04436 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
P04436 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.89□□□□□ -1.47
P04436 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
P04436 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
P04436 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
P04436 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
P04436 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
P04436 AL589993.1-201ENST00000407450 2524 ntBASIC5.88□□□□□ -1.47
P04436 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.88□□□□□ -1.47
P04436 TMCC1P1-201ENST00000518897 1980 ntBASIC5.88□□□□□ -1.47
P04436 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
P04436 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
P04436 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
P04436 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
P04436 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
P04436 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms