Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 YWHAZP4-201ENST00000392459 708 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 PSMA6P1-201ENST00000400275 741 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AL353626.3-201ENST00000413399 657 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AL139158.1-201ENST00000424719 340 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 GTF3AP6-201ENST00000432585 986 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AC117394.1-201ENST00000477323 567 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 OR7E22P-201ENST00000478335 1035 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 RPS27P20-201ENST00000492051 246 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 Vault.2-201ENST00000516519 98 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 RPL3P13-201ENST00000550415 216 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AL122023.1-201ENST00000622847 530 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AC018692.2-201ENST00000624130 348 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 SMG1P5-202ENST00000529428 4219 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 SMG1P2-201ENST00000566127 4221 ntBASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
CLIP2Q9UDT6 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 LINC01613-201ENST00000561476 2780 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 OR2M1P-201ENST00000318104 951 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 PRELID1P1-201ENST00000403549 660 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 RPL5P20-201ENST00000403848 896 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 SNORA11.5-201ENST00000408163 128 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 AC083862.1-201ENST00000427378 1242 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 COX4I1P2-201ENST00000447446 547 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 AC236972.4-201ENST00000458091 963 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 RPL5P12-201ENST00000477071 851 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 RPL23AP68-201ENST00000480924 445 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 AC117395.1-201ENST00000487390 403 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 OR4A13P-201ENST00000529316 942 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 AC004805.3-201ENST00000603178 310 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 AC023632.6-201ENST00000624338 2177 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 LCOR-201ENST00000286067 4542 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 AC025809.2-201ENST00000625085 1802 ntBASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.68□□□□□ -1.18
CLIP2Q9UDT6 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC007485.2-201ENST00000623493 1667 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 ZNF658B-201ENST00000602828 3408 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC009779.8-201ENST00000641684 4384 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 RN7SKP187-201ENST00000365536 330 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 AC003045.1-201ENST00000398779 713 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 RN7SKP86-201ENST00000410454 332 ntBASIC7.67□□□□□ -1.18
CLIP2Q9UDT6 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms