Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 PSMC1P7-201ENST00000495689 1315 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 OR5M9-201ENST00000279791 933 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 Y_RNA.356-201ENST00000365475 113 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 SNORA30-201ENST00000384028 129 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 RNU6-1200P-201ENST00000384162 107 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 RN7SKP110-201ENST00000410146 285 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 RPL21P111-201ENST00000418453 477 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 PUDPP1-201ENST00000421058 495 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 Z82198.3-201ENST00000421145 199 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 Z99497.1-201ENST00000421282 135 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AL590103.1-201ENST00000434488 307 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 LINC02020-204ENST00000435548 604 ntTSL 4 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 Z99127.3-201ENST00000448158 395 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 RHEBP1-201ENST00000448647 556 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 CDC42P1-201ENST00000456658 548 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC025062.1-201ENST00000465163 644 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC022336.1-201ENST00000475510 337 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC116337.2-201ENST00000477662 156 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 RN7SL267P-201ENST00000485107 261 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC080188.1-201ENST00000491923 567 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 PGAM1P9-201ENST00000503887 755 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 SRP72-202ENST00000504757 745 ntTSL 2 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 CCDC34P1-201ENST00000507441 517 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 RN7SKP70-201ENST00000516655 271 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AP001207.1-201ENST00000524051 481 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 ZNF705CP-201ENST00000530515 889 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 RBM4B-207ENST00000531969 769 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 OR7E161P-201ENST00000533722 967 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC023310.2-201ENST00000553844 547 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC090515.3-201ENST00000560431 315 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC010653.1-201ENST00000571108 881 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC008507.1-201ENST00000587506 734 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AP004372.1-201ENST00000604842 844 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 pRNA.9-201ENST00000618609 89 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC073569.3-201ENST00000619055 682 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC011389.3-201ENST00000623273 999 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC016582.3-206ENST00000636547 207 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 LRRC4C-204ENST00000530763 2669 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 ADGRG1-202ENST00000456916 3860 ntTSL 2 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 MBP-206ENST00000397863 4800 ntTSL 3 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 DBIL5P2-202ENST00000491724 1692 ntBASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CNTNAP3Q9BZ76 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CNTNAP3Q9BZ76 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNTNAP3Q9BZ76 MARCH1-214ENST00000514618 3903 ntTSL 5 BASIC7.85□□□□□ -1.15
CNTNAP3Q9BZ76 MTND5P1-201ENST00000445440 1375 ntBASIC7.85□□□□□ -1.15
CNTNAP3Q9BZ76 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CNTNAP3Q9BZ76 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms