Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 RNU1-46P-201ENST00000384425 164 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 U3.23-201ENST00000391132 200 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 NACAP7-201ENST00000407371 609 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 AC013268.2-201ENST00000420753 337 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 SNRPEP5-201ENST00000425442 278 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AC021876.1-201ENST00000425959 359 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AL590128.1-201ENST00000433407 286 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AC009518.3-201ENST00000438972 253 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 RPL23AP28-201ENST00000448062 470 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AL096803.1-201ENST00000456921 1021 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 RPSAP24-201ENST00000461543 873 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 AL135933.1-201ENST00000498657 802 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 NPM1P27-201ENST00000502784 830 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 AP001960.1-201ENST00000506494 658 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 DCAF13P2-201ENST00000514188 555 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 IGLC4-201ENST00000517690 248 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 AC107952.1-201ENST00000524200 376 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 PHBP2-201ENST00000532859 806 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AC140063.1-201ENST00000541343 259 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 PPIAP6-201ENST00000557078 499 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 FAM30C-201ENST00000561158 410 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 AF186192.2-204ENST00000581667 524 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AP006587.6-201ENST00000582128 1091 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 MIR4428-201ENST00000584884 73 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 AC087468.1-201ENST00000604365 630 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AC004839.1-201ENST00000610269 501 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AP000577.1-201ENST00000624366 878 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AC073857.1-201ENST00000625082 1054 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 SNORA16A-202ENST00000628458 135 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 AC062022.1-201ENST00000451026 1684 ntBASIC5.77□□□□□ -1.49
RFT1Q96AA3 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.77□□□□□ -1.49
RFT1Q96AA3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFT1Q96AA3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 AC022613.3-201ENST00000560740 1346 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 CASC19-228ENST00000641414 1684 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 RNU12-2P-201ENST00000364789 156 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 SNORA70.3-201ENST00000365075 132 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 PDCL3P5-201ENST00000398028 722 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 RN7SKP268-201ENST00000411107 316 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 RN7SKP161-201ENST00000411110 305 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 RN7SKP30-201ENST00000411373 334 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 HMGA1P8-201ENST00000414130 321 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 RPS26P38-201ENST00000414476 348 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 GAPDHP57-201ENST00000424400 585 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 FDPSP6-201ENST00000425091 512 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFT1Q96AA3 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 UBE2V2P1-201ENST00000434717 398 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 AL353803.3-201ENST00000444641 335 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 AC009963.4-201ENST00000448535 339 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 PCMTD1P3-201ENST00000451824 472 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 AP002371.1-201ENST00000463604 433 ntBASIC5.76□□□□□ -1.49
RFT1Q96AA3 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.76□□□□□ -1.49
RFT1Q96AA3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms