Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AC087392.3-202ENST00000358446 1754 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 RNA5SP333-201ENST00000363466 118 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 RNA5SP334-201ENST00000364825 118 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AL512637.1-201ENST00000439523 1231 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 KHDC1P1-201ENST00000511053 508 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 SUMO2P7-201ENST00000511179 285 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 CYP4A44P-201ENST00000569984 154 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 AP002884.5-201ENST00000595053 1132 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.24□□□□□ -1.41
RIF1Q5UIP0 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RIF1Q5UIP0 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC006511.2-201ENST00000388966 660 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 MIR550A3-201ENST00000390735 95 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 RN7SKP121-201ENST00000410842 305 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 RPL34P19-201ENST00000415903 342 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC073909.1-201ENST00000447112 999 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AL606490.1-201ENST00000452266 765 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC007386.1-201ENST00000455212 582 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 BX284632.1-201ENST00000478218 541 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC108693.1-201ENST00000496068 432 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC027026.1-201ENST00000532323 742 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AL592429.1-201ENST00000403909 1473 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC079949.2-201ENST00000617117 2933 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AL512593.1-201ENST00000444758 779 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 RN7SL714P-201ENST00000487050 298 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AP005597.2-201ENST00000526238 341 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 RN7SL208P-201ENST00000577964 296 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 MIR3135A-201ENST00000578460 77 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 MIR4646-201ENST00000580775 63 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC079395.2-201ENST00000610982 737 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 MRRFP1-201ENST00000435941 1675 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC138627.1-203ENST00000641872 1680 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC104825.2-201ENST00000505448 3249 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 AC011416.1-201ENST00000514947 1732 ntBASIC6.23□□□□□ -1.41
RIF1Q5UIP0 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.23□□□□□ -1.41
RIF1Q5UIP0 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RIF1Q5UIP0 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms