Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CKS1BP61024 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.57□□□□□ -1.68
CKS1BP61024 AL355355.1-201ENST00000442900 793 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.57□□□□□ -1.68
CKS1BP61024 CRYGGP-201ENST00000443337 145 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 CYCSP44-201ENST00000448560 313 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CKS1BP61024 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC4.57□□□□□ -1.68
CKS1BP61024 TAAR3P-201ENST00000466706 1078 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 MYL6P4-201ENST00000477911 453 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC4.57□□□□□ -1.68
CKS1BP61024 AC079944.1-201ENST00000485426 495 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 RN7SL284P-201ENST00000498823 275 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.57□□□□□ -1.68
CKS1BP61024 RFPL4AP5-201ENST00000514977 504 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 RN7SKP11-201ENST00000517018 287 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC4.57□□□□□ -1.68
CKS1BP61024 AC138832.1-201ENST00000522871 556 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC4.57□□□□□ -1.68
CKS1BP61024 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC4.57□□□□□ -1.68
CKS1BP61024 AC233290.1-201ENST00000553021 1186 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 AL049869.4-201ENST00000555669 178 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 SETP1-201ENST00000556014 845 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC4.57□□□□□ -1.68
CKS1BP61024 COX6CP7-201ENST00000597056 208 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 RN7SL820P-201ENST00000616437 299 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 AC025287.2-201ENST00000621911 668 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 AC012100.3-201ENST00000624738 575 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 FGL2-202ENST00000637771 989 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC4.57□□□□□ -1.68
CKS1BP61024 AC119674.1-209ENST00000642031 997 ntBASIC4.57□□□□□ -1.68
CKS1BP61024 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.57□□□□□ -1.68
CKS1BP61024 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
CKS1BP61024 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC4.57□□□□□ -1.68
CKS1BP61024 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CKS1BP61024 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.57□□□□□ -1.68
CKS1BP61024 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CKS1BP61024 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.57□□□□□ -1.68
CKS1BP61024 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CKS1BP61024 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CKS1BP61024 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CKS1BP61024 BTBD10P1-201ENST00000549824 1352 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.56□□□□□ -1.68
CKS1BP61024 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC4.56□□□□□ -1.68
CKS1BP61024 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CKS1BP61024 OR2M1P-201ENST00000318104 951 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 GNG5P2-201ENST00000372054 207 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CKS1BP61024 RPL7-203ENST00000396466 762 ntTSL 3 BASIC4.56□□□□□ -1.68
CKS1BP61024 AL359715.1-201ENST00000404330 555 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 RPL31-202ENST00000409000 641 ntTSL 2 BASIC4.56□□□□□ -1.68
CKS1BP61024 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC4.56□□□□□ -1.68
CKS1BP61024 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC4.56□□□□□ -1.68
CKS1BP61024 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC4.56□□□□□ -1.68
CKS1BP61024 PPIL1P1-201ENST00000423936 499 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 PRUNEP1-201ENST00000425846 705 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC4.56□□□□□ -1.68
CKS1BP61024 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC4.56□□□□□ -1.68
CKS1BP61024 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 AC245452.2-201ENST00000435222 392 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC4.56□□□□□ -1.68
CKS1BP61024 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC4.56□□□□□ -1.68
CKS1BP61024 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC4.56□□□□□ -1.68
CKS1BP61024 OR51P1P-201ENST00000447547 942 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC4.56□□□□□ -1.68
CKS1BP61024 ATP5G1P6-201ENST00000451206 412 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC4.56□□□□□ -1.68
CKS1BP61024 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC4.56□□□□□ -1.68
CKS1BP61024 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 RPS2P25-201ENST00000467247 580 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 RPL7P17-201ENST00000470927 724 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC4.56□□□□□ -1.68
CKS1BP61024 RN7SL685P-201ENST00000476271 298 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 RN7SL338P-201ENST00000481467 293 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 RNU6-513P-201ENST00000516104 104 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC4.56□□□□□ -1.68
CKS1BP61024 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC4.56□□□□□ -1.68
CKS1BP61024 AC136777.2-201ENST00000522979 358 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 IGLVV-66-201ENST00000523818 341 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 IGLV3-6-201ENST00000523937 250 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 AC007537.1-201ENST00000539347 327 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC4.56□□□□□ -1.68
CKS1BP61024 HIGD1AP9-201ENST00000550710 279 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 AC084033.2-201ENST00000551532 967 ntBASIC4.56□□□□□ -1.68
CKS1BP61024 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CKS1BP61024 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CKS1BP61024 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC4.56□□□□□ -1.68
CKS1BP61024 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 326.3 ms