Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HDAC4P56524 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
HDAC4P56524 RN7SKP221-201ENST00000410420 301 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.88□□□□□ -1.31
HDAC4P56524 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.88□□□□□ -1.31
HDAC4P56524 AP003385.1-201ENST00000426387 893 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.88□□□□□ -1.31
HDAC4P56524 UBBP5-201ENST00000446970 266 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 CEACAMP11-201ENST00000455211 583 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 AC236972.4-201ENST00000458091 963 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.88□□□□□ -1.31
HDAC4P56524 RN7SL790P-201ENST00000474043 298 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 OR9A1P-202ENST00000484361 945 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.88□□□□□ -1.31
HDAC4P56524 AC009567.2-201ENST00000502989 349 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.88□□□□□ -1.31
HDAC4P56524 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HDAC4P56524 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.88□□□□□ -1.31
HDAC4P56524 IGLV3-6-201ENST00000523937 250 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 AC084033.1-201ENST00000550830 633 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 AC005519.1-201ENST00000554490 601 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.88□□□□□ -1.31
HDAC4P56524 OR4C49P-201ENST00000563891 900 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.88□□□□□ -1.31
HDAC4P56524 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.88□□□□□ -1.31
HDAC4P56524 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.88□□□□□ -1.31
HDAC4P56524 SNORD96A-201ENST00000606577 79 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HDAC4P56524 MIR6889-201ENST00000613185 59 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.88□□□□□ -1.31
HDAC4P56524 AC132825.8-201ENST00000640783 297 ntBASIC6.88□□□□□ -1.31
HDAC4P56524 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HDAC4P56524 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HDAC4P56524 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HDAC4P56524 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HDAC4P56524 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.88□□□□□ -1.31
HDAC4P56524 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HDAC4P56524 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
HDAC4P56524 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.88□□□□□ -1.31
HDAC4P56524 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HDAC4P56524 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HDAC4P56524 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HDAC4P56524 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HDAC4P56524 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HDAC4P56524 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HDAC4P56524 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 AC025809.2-201ENST00000625085 1802 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.87□□□□□ -1.31
HDAC4P56524 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
HDAC4P56524 AC007159.1-201ENST00000566529 4706 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 FANCD2P2-201ENST00000437591 1400 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
HDAC4P56524 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
HDAC4P56524 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 OR7A2P-201ENST00000304105 930 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 AC010894.1-201ENST00000313760 361 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 RNA5SP308-201ENST00000362532 115 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 RNU1-46P-201ENST00000384425 164 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HDAC4P56524 AC019178.1-201ENST00000392337 440 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 AL034417.1-201ENST00000399343 800 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.87□□□□□ -1.31
HDAC4P56524 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.87□□□□□ -1.31
HDAC4P56524 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.87□□□□□ -1.31
HDAC4P56524 ARL4AP4-201ENST00000434170 518 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.87□□□□□ -1.31
HDAC4P56524 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.87□□□□□ -1.31
HDAC4P56524 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.87□□□□□ -1.31
HDAC4P56524 MRPL57P6-201ENST00000506570 309 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 MINOS1P4-201ENST00000515470 318 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 SCARNA5-201ENST00000516201 276 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.87□□□□□ -1.31
HDAC4P56524 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.87□□□□□ -1.31
HDAC4P56524 OR52K3P-201ENST00000531655 943 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.87□□□□□ -1.31
HDAC4P56524 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.87□□□□□ -1.31
HDAC4P56524 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.87□□□□□ -1.31
HDAC4P56524 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.87□□□□□ -1.31
HDAC4P56524 BUB1P1-201ENST00000603541 607 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.87□□□□□ -1.31
HDAC4P56524 AC093635.1-201ENST00000609028 555 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.87□□□□□ -1.31
HDAC4P56524 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.87□□□□□ -1.31
HDAC4P56524 AC138627.1-204ENST00000641894 765 ntBASIC6.87□□□□□ -1.31
HDAC4P56524 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
HDAC4P56524 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.87□□□□□ -1.31
HDAC4P56524 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HDAC4P56524 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms