Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.41□□□□□ -1.38
NR1H2P55055 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NR1H2P55055 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.4□□□□□ -1.38
NR1H2P55055 AC011503.2-201ENST00000594230 1500 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 AL136298.2-201ENST00000556497 1570 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NR1H2P55055 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NR1H2P55055 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
NR1H2P55055 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
NR1H2P55055 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NR1H2P55055 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NR1H2P55055 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NR1H2P55055 RPL24P4-201ENST00000326586 421 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 RN7SKP237-201ENST00000364663 301 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 RNU12-2P-201ENST00000364789 156 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 RPS3AP5-201ENST00000389400 821 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
NR1H2P55055 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.4□□□□□ -1.38
NR1H2P55055 RNA5SP177-201ENST00000410122 107 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.4□□□□□ -1.38
NR1H2P55055 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.4□□□□□ -1.38
NR1H2P55055 AC017019.1-201ENST00000426129 261 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 AL445528.1-201ENST00000426330 420 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NR1H2P55055 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.4□□□□□ -1.38
NR1H2P55055 RSL24D1P8-201ENST00000434442 492 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 RPL5P27-201ENST00000437011 881 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 ARL5AP3-201ENST00000439327 386 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.4□□□□□ -1.38
NR1H2P55055 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.4□□□□□ -1.38
NR1H2P55055 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.4□□□□□ -1.38
NR1H2P55055 AC073476.1-201ENST00000452854 407 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.4□□□□□ -1.38
NR1H2P55055 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.4□□□□□ -1.38
NR1H2P55055 PPP1R11P1-201ENST00000486095 376 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 RN7SL797P-201ENST00000486314 297 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 AC079594.1-201ENST00000489757 331 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 RPL7L1P7-201ENST00000509986 724 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 PGAM4P2-201ENST00000512491 721 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 ACTR6P1-201ENST00000514311 1104 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.4□□□□□ -1.38
NR1H2P55055 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.4□□□□□ -1.38
NR1H2P55055 AC233290.1-201ENST00000553021 1186 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.4□□□□□ -1.38
NR1H2P55055 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
NR1H2P55055 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.4□□□□□ -1.38
NR1H2P55055 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.4□□□□□ -1.38
NR1H2P55055 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.4□□□□□ -1.38
NR1H2P55055 ARGFXP2-201ENST00000579304 949 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.4□□□□□ -1.38
NR1H2P55055 AC005479.3-201ENST00000602790 431 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NR1H2P55055 MIR6070-201ENST00000613967 103 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NR1H2P55055 AL031658.2-201ENST00000616850 651 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 AC026367.3-201ENST00000619032 590 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 AC006213.5-201ENST00000619673 288 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 AC020763.5-201ENST00000623298 430 ntBASIC6.4□□□□□ -1.38
NR1H2P55055 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.4□□□□□ -1.38
NR1H2P55055 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
NR1H2P55055 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
NR1H2P55055 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
NR1H2P55055 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NR1H2P55055 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
NR1H2P55055 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NR1H2P55055 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NR1H2P55055 RBPJP6-201ENST00000411556 1431 ntBASIC6.4□□□□□ -1.39
NR1H2P55055 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
NR1H2P55055 Z95114.1-201ENST00000624264 14574 ntBASIC6.4□□□□□ -1.39
NR1H2P55055 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NR1H2P55055 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NR1H2P55055 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.39□□□□□ -1.39
NR1H2P55055 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NR1H2P55055 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NR1H2P55055 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.39□□□□□ -1.39
NR1H2P55055 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.39□□□□□ -1.39
NR1H2P55055 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.39□□□□□ -1.39
NR1H2P55055 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC105749.1-201ENST00000631338 2008 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.39□□□□□ -1.39
NR1H2P55055 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.39□□□□□ -1.39
NR1H2P55055 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NR1H2P55055 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 AL662791.3-201ENST00000413771 776 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.39□□□□□ -1.39
NR1H2P55055 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NR1H2P55055 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 AL133480.2-201ENST00000456723 487 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 RN7SL251P-201ENST00000464175 297 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 RN7SL561P-201ENST00000488553 281 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 AC008417.1-201ENST00000510014 565 ntBASIC6.39□□□□□ -1.39
NR1H2P55055 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.39□□□□□ -1.39
NR1H2P55055 AP002981.1-201ENST00000517692 975 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms