Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.34□□□□□ -1.39
SHMT2P34897 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.34□□□□□ -1.39
SHMT2P34897 AC124891.1-201ENST00000536322 519 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 BTG1P1-201ENST00000540396 508 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.34□□□□□ -1.39
SHMT2P34897 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHMT2P34897 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.34□□□□□ -1.39
SHMT2P34897 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.34□□□□□ -1.39
SHMT2P34897 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.34□□□□□ -1.39
SHMT2P34897 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.34□□□□□ -1.39
SHMT2P34897 AL157899.1-201ENST00000604110 936 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 AC091193.1-201ENST00000604640 448 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.34□□□□□ -1.39
SHMT2P34897 AC015819.1-201ENST00000613588 663 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 AC048341.3-201ENST00000619323 491 ntBASIC6.34□□□□□ -1.39
SHMT2P34897 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.34□□□□□ -1.39
SHMT2P34897 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.34□□□□□ -1.39
SHMT2P34897 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
SHMT2P34897 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SHMT2P34897 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
SHMT2P34897 AC005702.3-201ENST00000585345 1447 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.33□□□□□ -1.4
SHMT2P34897 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 AC062022.1-201ENST00000451026 1684 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SHMT2P34897 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 RNA5SP188-201ENST00000362916 129 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 RNU1-84P-201ENST00000365447 164 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 AL133260.1-201ENST00000405720 405 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.33□□□□□ -1.4
SHMT2P34897 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.33□□□□□ -1.4
SHMT2P34897 MRPS21P5-201ENST00000417885 231 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 FAM183DP-201ENST00000421987 399 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SHMT2P34897 AC013403.1-201ENST00000436954 263 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.33□□□□□ -1.4
SHMT2P34897 RPL9P15-201ENST00000491096 532 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 RPL5P14-201ENST00000494197 878 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 SNORA58-201ENST00000505219 137 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.33□□□□□ -1.4
SHMT2P34897 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.33□□□□□ -1.4
SHMT2P34897 TDGP1-201ENST00000543961 1229 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.33□□□□□ -1.4
SHMT2P34897 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.33□□□□□ -1.4
SHMT2P34897 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.33□□□□□ -1.4
SHMT2P34897 AP003789.1-201ENST00000617737 605 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 MIR6085-201ENST00000618314 110 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.33□□□□□ -1.4
SHMT2P34897 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SHMT2P34897 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.33□□□□□ -1.4
SHMT2P34897 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 AC009779.8-201ENST00000641684 4384 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.33□□□□□ -1.4
SHMT2P34897 AKAP17BP-201ENST00000431706 2719 ntBASIC6.33□□□□□ -1.4
SHMT2P34897 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.33□□□□□ -1.4
SHMT2P34897 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHMT2P34897 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 CDY3P-201ENST00000454543 1618 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
SHMT2P34897 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SHMT2P34897 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.32□□□□□ -1.4
SHMT2P34897 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SHMT2P34897 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SHMT2P34897 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SHMT2P34897 STAG3L4-201ENST00000352103 530 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SHMT2P34897 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.32□□□□□ -1.4
SHMT2P34897 RN7SKP129-201ENST00000410288 299 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 RPL23AP85-201ENST00000421838 433 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.32□□□□□ -1.4
SHMT2P34897 AL139415.1-201ENST00000424862 352 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.32□□□□□ -1.4
SHMT2P34897 H3F3BP1-201ENST00000440551 403 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 AC234771.2-201ENST00000445718 597 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.32□□□□□ -1.4
SHMT2P34897 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 AC236972.4-201ENST00000458091 963 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.32□□□□□ -1.4
SHMT2P34897 AC044810.1-201ENST00000480271 711 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms