Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 MIR4732-201ENST00000581873 76 ntBASIC6.48□□□□□ -1.37
CDH3P22223 MIR212-201ENST00000586026 110 ntBASIC6.48□□□□□ -1.37
CDH3P22223 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.48□□□□□ -1.37
CDH3P22223 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.48□□□□□ -1.37
CDH3P22223 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
CDH3P22223 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH3P22223 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH3P22223 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH3P22223 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 AP005139.1-201ENST00000580702 1647 ntBASIC6.47□□□□□ -1.37
CDH3P22223 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CDH3P22223 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH3P22223 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 RPL12P13-201ENST00000310055 497 ntBASIC6.47□□□□□ -1.37
CDH3P22223 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 AL359694.1-201ENST00000403247 604 ntBASIC6.47□□□□□ -1.37
CDH3P22223 AL590635.1-201ENST00000406314 586 ntBASIC6.47□□□□□ -1.37
CDH3P22223 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.47□□□□□ -1.37
CDH3P22223 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.47□□□□□ -1.37
CDH3P22223 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH3P22223 AC004890.1-201ENST00000461005 181 ntBASIC6.47□□□□□ -1.37
CDH3P22223 AL390198.2-201ENST00000510553 222 ntBASIC6.47□□□□□ -1.37
CDH3P22223 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH3P22223 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH3P22223 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH3P22223 OR9L1P-201ENST00000529493 933 ntBASIC6.47□□□□□ -1.37
CDH3P22223 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CDH3P22223 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.47□□□□□ -1.37
CDH3P22223 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH3P22223 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 AL445383.1-201ENST00000554689 874 ntBASIC6.47□□□□□ -1.37
CDH3P22223 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.47□□□□□ -1.37
CDH3P22223 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH3P22223 AC091304.4-201ENST00000565703 620 ntBASIC6.47□□□□□ -1.37
CDH3P22223 AC007066.2-202ENST00000566531 914 ntBASIC6.47□□□□□ -1.37
CDH3P22223 SNORA70D-201ENST00000578836 135 ntBASIC6.47□□□□□ -1.37
CDH3P22223 RN7SL270P-201ENST00000579643 281 ntBASIC6.47□□□□□ -1.37
CDH3P22223 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.47□□□□□ -1.37
CDH3P22223 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH3P22223 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH3P22223 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH3P22223 AC091768.1-201ENST00000609258 930 ntBASIC6.47□□□□□ -1.37
CDH3P22223 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH3P22223 AC061999.1-201ENST00000624454 177 ntBASIC6.47□□□□□ -1.37
CDH3P22223 AL035425.4-201ENST00000624509 1063 ntBASIC6.47□□□□□ -1.37
CDH3P22223 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH3P22223 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CDH3P22223 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
CDH3P22223 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH3P22223 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 HCFC2P1-201ENST00000392864 1592 ntBASIC6.47□□□□□ -1.37
CDH3P22223 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH3P22223 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.47□□□□□ -1.37
CDH3P22223 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 TATDN2P3-201ENST00000452855 3665 ntBASIC6.47□□□□□ -1.37
CDH3P22223 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH3P22223 AL359694.2-201ENST00000567753 1615 ntBASIC6.47□□□□□ -1.37
CDH3P22223 ASNSP6-201ENST00000592770 1618 ntBASIC6.47□□□□□ -1.37
CDH3P22223 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH3P22223 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH3P22223 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH3P22223 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CDH3P22223 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH3P22223 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
CDH3P22223 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH3P22223 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CDH3P22223 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH3P22223 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH3P22223 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH3P22223 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDH3P22223 SNORA70.3-201ENST00000365075 132 ntBASIC6.46□□□□□ -1.38
CDH3P22223 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CDH3P22223 UBTFL2-201ENST00000411859 1191 ntBASIC6.46□□□□□ -1.38
CDH3P22223 RPS7P12-201ENST00000422385 582 ntBASIC6.46□□□□□ -1.38
CDH3P22223 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH3P22223 PSMC1P2-201ENST00000423961 1204 ntBASIC6.46□□□□□ -1.38
CDH3P22223 BMP6P1-201ENST00000431230 679 ntBASIC6.46□□□□□ -1.38
CDH3P22223 GAPDHP19-201ENST00000431768 1005 ntBASIC6.46□□□□□ -1.38
CDH3P22223 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms