Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC6.11□□□□□ -1.43
COL5A1P20908 UGT2B27P-201ENST00000505092 1620 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL5A1P20908 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL5A1P20908 RNU1-150P-201ENST00000362491 162 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 RN7SKP216-201ENST00000411050 312 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.11□□□□□ -1.43
COL5A1P20908 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.11□□□□□ -1.43
COL5A1P20908 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.11□□□□□ -1.43
COL5A1P20908 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.11□□□□□ -1.43
COL5A1P20908 MYO5BP2-201ENST00000449815 1277 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.11□□□□□ -1.43
COL5A1P20908 AC023141.9-201ENST00000458734 412 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.11□□□□□ -1.43
COL5A1P20908 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.11□□□□□ -1.43
COL5A1P20908 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL5A1P20908 AL390726.5-202ENST00000564800 256 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 AC010547.6-201ENST00000571789 193 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 MIR3176-201ENST00000582210 90 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 RFPL4AP6-201ENST00000616792 846 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 MIR7159-201ENST00000620587 66 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.11□□□□□ -1.43
COL5A1P20908 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL5A1P20908 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL5A1P20908 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL5A1P20908 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
COL5A1P20908 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.1□□□□□ -1.43
COL5A1P20908 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.1□□□□□ -1.43
COL5A1P20908 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.1□□□□□ -1.43
COL5A1P20908 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
COL5A1P20908 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.1□□□□□ -1.43
COL5A1P20908 AC092821.2-201ENST00000545710 2042 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 AL591848.4-201ENST00000567832 3472 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 AL391361.1-201ENST00000405580 489 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 BX284632.2-201ENST00000421091 399 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 AL512605.1-202ENST00000441919 381 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 AL359955.2-201ENST00000445380 353 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.1□□□□□ -1.43
COL5A1P20908 VN1R38P-201ENST00000450265 887 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 HIGD1AP16-201ENST00000450986 258 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 AC026348.1-201ENST00000462549 1053 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.1□□□□□ -1.43
COL5A1P20908 RNA5SP362-201ENST00000516048 118 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.1□□□□□ -1.43
COL5A1P20908 MIR5095-201ENST00000578844 88 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL5A1P20908 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 EIF3EP1-201ENST00000433978 1316 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 AC122713.2-201ENST00000624942 3335 ntBASIC6.1□□□□□ -1.43
COL5A1P20908 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL5A1P20908 CASC19-228ENST00000641414 1684 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
COL5A1P20908 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.09□□□□□ -1.43
COL5A1P20908 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL5A1P20908 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 COL6A4P1-202ENST00000487147 4317 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.09□□□□□ -1.43
COL5A1P20908 EEF1B2P8-201ENST00000414101 671 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.09□□□□□ -1.43
COL5A1P20908 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.09□□□□□ -1.43
COL5A1P20908 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.09□□□□□ -1.43
COL5A1P20908 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.09□□□□□ -1.43
COL5A1P20908 AL161636.2-201ENST00000445179 927 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.09□□□□□ -1.43
COL5A1P20908 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.09□□□□□ -1.43
COL5A1P20908 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 AC022826.1-201ENST00000519383 805 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.09□□□□□ -1.43
COL5A1P20908 AP000648.1-201ENST00000529682 397 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.09□□□□□ -1.43
COL5A1P20908 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.09□□□□□ -1.43
COL5A1P20908 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.09□□□□□ -1.43
COL5A1P20908 AC090616.1-201ENST00000583895 447 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 AL031601.1-201ENST00000605702 394 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 AL352984.2-201ENST00000611153 546 ntBASIC6.09□□□□□ -1.43
COL5A1P20908 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL5A1P20908 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms