Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.98□□□□□ -1.29
RB1P06400 AC092266.1-201ENST00000610958 165 ntBASIC6.98□□□□□ -1.29
RB1P06400 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.98□□□□□ -1.29
RB1P06400 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 MIR8089-201ENST00000620165 82 ntBASIC6.98□□□□□ -1.29
RB1P06400 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.98□□□□□ -1.29
RB1P06400 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.98□□□□□ -1.29
RB1P06400 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
RB1P06400 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.98□□□□□ -1.29
RB1P06400 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 AC078880.4-201ENST00000617627 1749 ntBASIC6.98□□□□□ -1.29
RB1P06400 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.98□□□□□ -1.29
RB1P06400 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.98□□□□□ -1.29
RB1P06400 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.98□□□□□ -1.29
RB1P06400 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RB1P06400 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.98□□□□□ -1.29
RB1P06400 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 AL034417.4-202ENST00000642135 2236 ntBASIC6.97□□□□□ -1.29
RB1P06400 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.97□□□□□ -1.29
RB1P06400 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.97□□□□□ -1.29
RB1P06400 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.97□□□□□ -1.29
RB1P06400 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 MTCO1P28-201ENST00000574177 1528 ntBASIC6.97□□□□□ -1.29
RB1P06400 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.97□□□□□ -1.29
RB1P06400 AC096992.2-201ENST00000609553 1684 ntBASIC6.97□□□□□ -1.29
RB1P06400 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.97□□□□□ -1.29
RB1P06400 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RB1P06400 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 SNORA51.1-201ENST00000363243 140 ntBASIC6.97□□□□□ -1.29
RB1P06400 RPL5P20-201ENST00000403848 896 ntBASIC6.97□□□□□ -1.29
RB1P06400 RN7SKP108-201ENST00000411367 328 ntBASIC6.97□□□□□ -1.29
RB1P06400 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
RB1P06400 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.97□□□□□ -1.29
RB1P06400 CXCR2P1-202ENST00000443392 1074 ntBASIC6.97□□□□□ -1.29
RB1P06400 VN1R96P-201ENST00000446052 858 ntBASIC6.97□□□□□ -1.29
RB1P06400 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.97□□□□□ -1.29
RB1P06400 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
RB1P06400 AC026826.1-201ENST00000493002 361 ntBASIC6.97□□□□□ -1.29
RB1P06400 RN7SL104P-201ENST00000498686 293 ntBASIC6.97□□□□□ -1.29
RB1P06400 KHDC1P1-201ENST00000511053 508 ntBASIC6.97□□□□□ -1.29
RB1P06400 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.97□□□□□ -1.29
RB1P06400 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.97□□□□□ -1.29
RB1P06400 AC008521.2-201ENST00000591021 259 ntBASIC6.97□□□□□ -1.29
RB1P06400 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.97□□□□□ -1.29
RB1P06400 AL080312.2-201ENST00000613001 630 ntBASIC6.97□□□□□ -1.29
RB1P06400 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.97□□□□□ -1.29
RB1P06400 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.97□□□□□ -1.29
RB1P06400 AC129778.1-202ENST00000623812 261 ntBASIC6.97□□□□□ -1.29
RB1P06400 AP000577.1-201ENST00000624366 878 ntBASIC6.97□□□□□ -1.29
RB1P06400 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.97□□□□□ -1.29
RB1P06400 AL591379.1-207ENST00000635982 261 ntBASIC6.97□□□□□ -1.29
RB1P06400 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.97□□□□□ -1.29
RB1P06400 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.97□□□□□ -1.29
RB1P06400 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.97□□□□□ -1.29
RB1P06400 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
RB1P06400 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.97□□□□□ -1.29
RB1P06400 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.97□□□□□ -1.29
RB1P06400 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.97□□□□□ -1.29
RB1P06400 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
RB1P06400 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RB1P06400 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RB1P06400 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.96□□□□□ -1.29
RB1P06400 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RB1P06400 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.96□□□□□ -1.29
RB1P06400 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
RB1P06400 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RB1P06400 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
RB1P06400 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RB1P06400 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RB1P06400 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RB1P06400 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
RB1P06400 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.96□□□□□ -1.3
RB1P06400 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
RB1P06400 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.96□□□□□ -1.3
RB1P06400 RN7SKP69-201ENST00000365390 305 ntBASIC6.96□□□□□ -1.3
RB1P06400 RN7SKP81-201ENST00000365603 331 ntBASIC6.96□□□□□ -1.3
RB1P06400 AL157702.1-201ENST00000398764 426 ntBASIC6.96□□□□□ -1.3
RB1P06400 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RB1P06400 NPM1P25-201ENST00000429734 854 ntBASIC6.96□□□□□ -1.3
RB1P06400 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.96□□□□□ -1.3
RB1P06400 AC094019.1-201ENST00000434678 472 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms