Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 ELOCP6-201ENST00000429066 328 ntBASIC7.65□□□□□ -1.18
HLA-DOAP06340 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 RBMY3AP-201ENST00000449381 1145 ntBASIC7.65□□□□□ -1.18
HLA-DOAP06340 ELOCP12-201ENST00000458706 328 ntBASIC7.65□□□□□ -1.18
HLA-DOAP06340 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 OR52A4P-202ENST00000481634 799 ntBASIC7.65□□□□□ -1.18
HLA-DOAP06340 OR52A4P-203ENST00000498233 1014 ntBASIC7.65□□□□□ -1.18
HLA-DOAP06340 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 HMGN1P17-201ENST00000513734 295 ntBASIC7.65□□□□□ -1.18
HLA-DOAP06340 IGHV3-57-201ENST00000520143 280 ntBASIC7.65□□□□□ -1.18
HLA-DOAP06340 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-DOAP06340 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 AC079315.1-201ENST00000602952 623 ntBASIC7.65□□□□□ -1.18
HLA-DOAP06340 AC073046.2-201ENST00000604756 527 ntBASIC7.65□□□□□ -1.18
HLA-DOAP06340 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-DOAP06340 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
HLA-DOAP06340 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
HLA-DOAP06340 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
HLA-DOAP06340 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AL353743.3-201ENST00000442109 1468 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-DOAP06340 SNORD16-201ENST00000362803 99 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 OR7E156P-201ENST00000400303 464 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 GCNT1P4-201ENST00000404096 329 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 MIR1282-201ENST00000408865 101 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 AL035422.1-201ENST00000414193 397 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AL157884.1-201ENST00000424561 454 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC007679.3-201ENST00000434035 414 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 AL645936.1-201ENST00000441979 518 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 RPL5P7-201ENST00000444235 813 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 CEACAMP5-201ENST00000448037 961 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC090079.2-201ENST00000575289 768 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC100814.1-201ENST00000606963 623 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-DOAP06340 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
HLA-DOAP06340 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-DOAP06340 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-DOAP06340 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-DOAP06340 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-DOAP06340 OR2AH1P-202ENST00000641232 2744 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-DOAP06340 AC083806.2-201ENST00000617795 2685 ntBASIC7.64□□□□□ -1.19
HLA-DOAP06340 AL596244.1-201ENST00000567068 3779 ntBASIC7.63□□□□□ -1.19
HLA-DOAP06340 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-DOAP06340 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-DOAP06340 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-DOAP06340 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-DOAP06340 RNA5SP433-201ENST00000364491 114 ntBASIC7.63□□□□□ -1.19
HLA-DOAP06340 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-DOAP06340 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-DOAP06340 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 AL139156.3-201ENST00000454802 394 ntBASIC7.63□□□□□ -1.19
HLA-DOAP06340 AP002453.1-201ENST00000492327 668 ntBASIC7.63□□□□□ -1.19
HLA-DOAP06340 IGLV3-6-201ENST00000523937 250 ntBASIC7.63□□□□□ -1.19
HLA-DOAP06340 OR4A13P-201ENST00000529316 942 ntBASIC7.63□□□□□ -1.19
HLA-DOAP06340 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 TPRX1P1-201ENST00000557620 319 ntBASIC7.63□□□□□ -1.19
HLA-DOAP06340 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-DOAP06340 MIR4310-201ENST00000582950 57 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms