Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 PPATP2-201ENST00000605635 508 ntBASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 MIR6883-201ENST00000614952 78 ntBASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 AC078909.2-201ENST00000620584 398 ntBASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 AC211433.3-201ENST00000623770 375 ntBASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 AC073365.1-203ENST00000641055 1992 ntBASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 MKI67P1-201ENST00000604297 1460 ntBASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PACSIN3Q9UKS6 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
PACSIN3Q9UKS6 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
PACSIN3Q9UKS6 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.52□□□□□ -1.36
PACSIN3Q9UKS6 FBXL21-201ENST00000297158 1305 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 RACGAP1P-201ENST00000550663 1879 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AP002370.1-201ENST00000528055 1602 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 RNA5SP65-201ENST00000363166 119 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 MIR122-201ENST00000385044 85 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AL353692.2-201ENST00000407054 335 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 RNA5SP177-201ENST00000410122 107 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AL359633.1-201ENST00000421403 310 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 MORF4L1P7-201ENST00000426038 703 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 ANXA2P2-201ENST00000435128 1020 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AL604028.2-201ENST00000437848 788 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 MTCO2P6-201ENST00000463134 685 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 RPL34P34-201ENST00000465389 354 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 CHCHD2P7-201ENST00000508008 452 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC025768.1-201ENST00000510057 267 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC005351.1-201ENST00000511152 786 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC110056.1-201ENST00000525759 911 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 OR5M4P-201ENST00000529436 925 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AP000919.1-201ENST00000582850 985 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 PRELID3BP3-201ENST00000584963 545 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC064807.4-201ENST00000607201 407 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 PTCHD3P1-201ENST00000612350 537 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AL161931.1-201ENST00000612768 246 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 MIR6774-201ENST00000614651 70 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC009159.2-201ENST00000617603 606 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC007347.2-201ENST00000623044 180 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 SAMMSON-214ENST00000641395 1264 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC010168.2-201ENST00000562691 5428 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC079949.2-201ENST00000617117 2933 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC007485.2-201ENST00000623493 1667 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 AC087392.3-202ENST00000358446 1754 ntBASIC6.52□□□□□ -1.37
PACSIN3Q9UKS6 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 AP000547.3-204ENST00000588548 2523 ntBASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 AL031123.3-201ENST00000623345 1837 ntBASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 ZNF37CP-201ENST00000406795 241 ntBASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 AL139100.1-201ENST00000408001 498 ntBASIC6.51□□□□□ -1.37
PACSIN3Q9UKS6 PPIAP23-201ENST00000420099 497 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms