Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC011416.1-201ENST00000514947 1732 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 RNA5SP350-201ENST00000363298 111 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AC130360.1-201ENST00000425489 1117 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AC130365.2-201ENST00000525882 1201 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AC006924.1-201ENST00000610750 559 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 HDAC1P2-201ENST00000453661 1398 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AC104966.1-201ENST00000467010 1464 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AL391262.1-201ENST00000556558 1992 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 KCNMB3P1-202ENST00000493696 3389 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 RN7SKP237-201ENST00000364663 301 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AC090958.1-201ENST00000511122 351 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AC108103.1-201ENST00000511286 446 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 PRMT5P1-201ENST00000514351 598 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AC007346.1-201ENST00000569208 867 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC9.82□□□□□ -0.84
VPS8Q8N3P4 AL137067.2-201ENST00000621202 131 ntBASIC9.82□□□□□ -0.84
VPS8Q8N3P4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 IARS-213ENST00000627121 4587 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AC022507.1-201ENST00000548349 1505 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 MIR130B-202ENST00000385018 82 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 PSMD10P2-201ENST00000432890 672 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AL158068.1-201ENST00000506116 616 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AC010343.2-201ENST00000510162 224 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 Y_RNA.710-201ENST00000516975 110 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 OR6M2P-201ENST00000529831 871 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 OR4A40P-201ENST00000533878 948 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AC073333.2-201ENST00000603589 769 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AC008555.7-201ENST00000605008 583 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AP001437.1-201ENST00000608783 456 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 AC092266.1-201ENST00000610958 165 ntBASIC9.81□□□□□ -0.84
VPS8Q8N3P4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
VPS8Q8N3P4 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 AC008627.1-201ENST00000517511 1704 ntBASIC9.8□□□□□ -0.84
VPS8Q8N3P4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
VPS8Q8N3P4 SNORA77.2-201ENST00000408571 112 ntBASIC9.8□□□□□ -0.84
VPS8Q8N3P4 RNA5SP115-201ENST00000411160 107 ntBASIC9.8□□□□□ -0.84
VPS8Q8N3P4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms