Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 AC007406.5-201ENST00000570140 3170 ntBASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 LINC01613-201ENST00000561476 2780 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 ABCA11P-202ENST00000504019 2110 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 RN7SKP250-201ENST00000363924 321 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AL157884.1-201ENST00000424561 454 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 RPSAP32-201ENST00000432681 526 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 CCNJP2-201ENST00000457810 1163 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AC005165.2-201ENST00000466070 380 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 FTH1P8-201ENST00000498161 514 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 HMGN1P16-201ENST00000508308 283 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AC093816.1-201ENST00000515076 913 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AC084337.1-201ENST00000524809 686 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AC090616.1-201ENST00000583895 447 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 uc_338.29-201ENST00000615099 168 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 AL122023.1-201ENST00000622847 530 ntBASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
C9orf40Q8IXQ3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 RPL11P4-201ENST00000332269 436 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 SNORD16-201ENST00000362803 99 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 DHFRP2-201ENST00000414224 547 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 THEM7P-201ENST00000419556 672 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC097359.1-201ENST00000447946 463 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 H3F3AP5-201ENST00000475267 429 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AL117692.1-201ENST00000494283 713 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC106822.1-201ENST00000502647 526 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 SNORA74.1-201ENST00000516320 180 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 IGKV1D-22-201ENST00000518953 324 ntBASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
C9orf40Q8IXQ3 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms