Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RBMY2DP-202ENST00000448881 1157 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 RBMY2BP-202ENST00000451071 1156 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.42□□□□□ -1.22
CCNA1P78396 AC084754.1-201ENST00000463466 464 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 RN7SL643P-201ENST00000471845 291 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 RPL7P51-201ENST00000490532 749 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 AC036111.2-201ENST00000533247 901 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.42□□□□□ -1.22
CCNA1P78396 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.42□□□□□ -1.22
CCNA1P78396 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.42□□□□□ -1.22
CCNA1P78396 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.42□□□□□ -1.22
CCNA1P78396 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.42□□□□□ -1.22
CCNA1P78396 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.42□□□□□ -1.22
CCNA1P78396 AC092266.1-201ENST00000610958 165 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 AC016590.3-201ENST00000611171 753 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 MIR6729-201ENST00000618194 65 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 AC131009.3-201ENST00000621809 287 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.42□□□□□ -1.22
CCNA1P78396 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CCNA1P78396 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CCNA1P78396 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CCNA1P78396 AP003119.3-201ENST00000566747 4192 ntBASIC7.41□□□□□ -1.22
CCNA1P78396 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.41□□□□□ -1.22
CCNA1P78396 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
CCNA1P78396 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.41□□□□□ -1.22
CCNA1P78396 AC005522.1-201ENST00000395416 346 ntBASIC7.41□□□□□ -1.22
CCNA1P78396 AC096537.2-201ENST00000413707 714 ntBASIC7.41□□□□□ -1.22
CCNA1P78396 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.41□□□□□ -1.22
CCNA1P78396 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.41□□□□□ -1.22
CCNA1P78396 AC095052.1-201ENST00000509955 863 ntBASIC7.41□□□□□ -1.22
CCNA1P78396 RNA5SP206-201ENST00000516703 121 ntBASIC7.41□□□□□ -1.22
CCNA1P78396 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.41□□□□□ -1.22
CCNA1P78396 AC027369.2-201ENST00000528030 440 ntBASIC7.41□□□□□ -1.22
CCNA1P78396 NANOGNBP2-201ENST00000544753 553 ntBASIC7.41□□□□□ -1.22
CCNA1P78396 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.41□□□□□ -1.22
CCNA1P78396 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.41□□□□□ -1.22
CCNA1P78396 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.41□□□□□ -1.22
CCNA1P78396 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.41□□□□□ -1.22
CCNA1P78396 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.41□□□□□ -1.22
CCNA1P78396 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.41□□□□□ -1.22
CCNA1P78396 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.41□□□□□ -1.22
CCNA1P78396 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.41□□□□□ -1.22
CCNA1P78396 AC027575.3-201ENST00000583058 2747 ntBASIC7.41□□□□□ -1.22
CCNA1P78396 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.41□□□□□ -1.22
CCNA1P78396 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCNA1P78396 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCNA1P78396 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCNA1P78396 AL021877.2-201ENST00000624442 10684 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCNA1P78396 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.4□□□□□ -1.22
CCNA1P78396 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCNA1P78396 AP001157.1-201ENST00000550837 2339 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.4□□□□□ -1.22
CCNA1P78396 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.4□□□□□ -1.22
CCNA1P78396 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
CCNA1P78396 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.4□□□□□ -1.22
CCNA1P78396 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.4□□□□□ -1.22
CCNA1P78396 AC092111.1-201ENST00000618256 3358 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCNA1P78396 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCNA1P78396 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CCNA1P78396 SNORD16-201ENST00000362803 99 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 RN7SKP108-201ENST00000411367 328 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 IPPKP1-201ENST00000422501 768 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.4□□□□□ -1.22
CCNA1P78396 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.4□□□□□ -1.22
CCNA1P78396 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCNA1P78396 CEACAMP5-201ENST00000448037 961 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 PPIAP27-201ENST00000453800 265 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.4□□□□□ -1.22
CCNA1P78396 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.4□□□□□ -1.22
CCNA1P78396 RPL12P31-201ENST00000478433 450 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 AC104109.1-201ENST00000498563 436 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 COX6B1P4-201ENST00000519826 484 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 IGHV4-55-201ENST00000520889 368 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms