Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.26□□□□□ -1.41
CLRN1P58418 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.26□□□□□ -1.41
CLRN1P58418 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.26□□□□□ -1.41
CLRN1P58418 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.26□□□□□ -1.41
CLRN1P58418 HMGB3P19-201ENST00000403971 560 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.26□□□□□ -1.41
CLRN1P58418 RNA5SP177-201ENST00000410122 107 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.26□□□□□ -1.41
CLRN1P58418 MTATP6P20-201ENST00000414147 562 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 RAB9AP4-201ENST00000415230 609 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 AL158827.1-201ENST00000416300 391 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 VDAC1P10-201ENST00000416715 891 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 VN1R31P-201ENST00000417498 730 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.26□□□□□ -1.41
CLRN1P58418 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.26□□□□□ -1.41
CLRN1P58418 AC092447.2-201ENST00000435487 669 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 AC092647.3-201ENST00000443044 633 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 AC092421.1-201ENST00000448148 418 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 RARRES2P3-201ENST00000457739 473 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 STRADBP1-201ENST00000478954 1281 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.26□□□□□ -1.41
CLRN1P58418 AC095057.1-201ENST00000507583 168 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 RNA5SP518-201ENST00000515957 119 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 SCARNA6-201ENST00000515982 265 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 RNU6-276P-201ENST00000516114 96 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.26□□□□□ -1.41
CLRN1P58418 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
CLRN1P58418 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.26□□□□□ -1.41
CLRN1P58418 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.26□□□□□ -1.41
CLRN1P58418 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.26□□□□□ -1.41
CLRN1P58418 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CLRN1P58418 FRG2IP-201ENST00000563581 781 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.26□□□□□ -1.41
CLRN1P58418 AC013444.2-201ENST00000603317 787 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 AC073333.2-201ENST00000603589 769 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 AC005070.2-201ENST00000604391 260 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 AL365400.2-201ENST00000605604 902 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 RNU4-5P-201ENST00000607255 135 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 AL031777.2-201ENST00000611953 196 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 MIR6726-201ENST00000613751 61 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CLRN1P58418 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CLRN1P58418 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
CLRN1P58418 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.26□□□□□ -1.41
CLRN1P58418 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC6.26□□□□□ -1.41
CLRN1P58418 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 AC092701.1-201ENST00000623627 1551 ntBASIC6.26□□□□□ -1.41
CLRN1P58418 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CLRN1P58418 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.26□□□□□ -1.41
CLRN1P58418 GOT2P1-201ENST00000440922 1309 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.25□□□□□ -1.41
CLRN1P58418 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.25□□□□□ -1.41
CLRN1P58418 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CLRN1P58418 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.25□□□□□ -1.41
CLRN1P58418 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.25□□□□□ -1.41
CLRN1P58418 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLRN1P58418 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.25□□□□□ -1.41
CLRN1P58418 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.25□□□□□ -1.41
CLRN1P58418 RPL12P10-201ENST00000413498 498 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 RPL23AP18-201ENST00000416139 468 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 NANOGP5-201ENST00000424456 877 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 MTND5P25-201ENST00000430499 799 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AL604028.2-201ENST00000437848 788 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 CR391992.1-201ENST00000438601 394 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 MED6P1-201ENST00000439659 713 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.25□□□□□ -1.41
CLRN1P58418 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.25□□□□□ -1.41
CLRN1P58418 BUD31P2-201ENST00000449374 300 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 Z99714.1-201ENST00000450463 807 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 RPL23AP23-201ENST00000452590 471 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 RPLP0P1-201ENST00000457002 361 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 BX323845.2-201ENST00000458382 234 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 AC135721.2-201ENST00000464237 300 ntBASIC6.25□□□□□ -1.41
CLRN1P58418 RPL21P18-201ENST00000469899 480 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms