Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DMAP28067 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DMAP28067 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DMAP28067 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DMAP28067 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DMAP28067 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HLA-DMAP28067 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DMAP28067 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DMAP28067 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DMAP28067 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DMAP28067 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DMAP28067 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DMAP28067 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DMAP28067 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 ICE2P1-201ENST00000512800 1849 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DMAP28067 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DMAP28067 RNA5SP53-201ENST00000391299 120 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 RN7SKP151-201ENST00000410230 316 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 CYP4F34P-201ENST00000425951 481 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 GAPDHP75-201ENST00000433910 943 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DMAP28067 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DMAP28067 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 AC008620.1-201ENST00000468453 592 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DMAP28067 RN7SL282P-201ENST00000479676 297 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 AC022415.1-202ENST00000486612 523 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 AC117392.1-201ENST00000487061 596 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 AC026782.2-201ENST00000510845 636 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 IGLC4-201ENST00000517690 248 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 NATP-201ENST00000523491 878 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 AC140063.1-201ENST00000541343 259 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 AL049840.5-201ENST00000602827 552 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 MRPL57P1-201ENST00000621486 265 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 AL132640.3-201ENST00000630473 177 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DMAP28067 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DMAP28067 HSPD1P1-201ENST00000503199 1726 ntBASIC5.54□□□□□ -1.52
HLA-DMAP28067 BIN2P1-201ENST00000504996 1530 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AL359955.1-201ENST00000455242 3275 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC138907.8-201ENST00000623981 2256 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 RNA5SP177-201ENST00000410122 107 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC134879.1-201ENST00000426062 394 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 USP24P1-201ENST00000433802 779 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 ST13P2-201ENST00000438916 1109 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 RPS26P6-201ENST00000475156 348 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC021146.11-201ENST00000503319 491 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC091965.3-201ENST00000506236 208 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 ST13P12-201ENST00000508958 1094 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 HIGD1AP9-201ENST00000550710 279 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DMAP28067 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 RN7SL25P-201ENST00000583862 260 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 MIR4786-201ENST00000583954 80 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC005277.2-201ENST00000617898 390 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 PART1_3.1-201ENST00000619680 131 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DMAP28067 AP001264.1-201ENST00000620602 703 ntBASIC5.53□□□□□ -1.52
HLA-DMAP28067 AC012100.3-201ENST00000624738 575 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms