Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.05□□□□□ -1.6
RBFOX3A6NFN3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 RNA5SP427-201ENST00000365323 119 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 RNU2-5P-201ENST00000410533 180 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 RBMY2JP-201ENST00000425544 1059 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 KRT8P51-201ENST00000438938 274 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC092967.1-201ENST00000449016 481 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 PCMTD1P3-201ENST00000451824 472 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 RN7SL58P-201ENST00000473445 294 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AL591122.1-201ENST00000487348 492 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC021146.11-201ENST00000503319 491 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC008945.1-201ENST00000505144 499 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 FOLH1B-202ENST00000529567 2145 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC018523.1-201ENST00000534211 512 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC133569.1-201ENST00000564327 373 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AL583832.1-201ENST00000603227 784 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC027334.1-201ENST00000603257 310 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AL592504.1-201ENST00000605319 439 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 uc_338.37-201ENST00000620113 186 ntBASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RBFOX3A6NFN3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 CCNT2P1-201ENST00000423082 1315 ntBASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 GOT2P1-201ENST00000440922 1309 ntBASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 ARMCX7P-201ENST00000372828 562 ntBASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 OR7E91P-201ENST00000400027 866 ntBASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 RN7SKP39-201ENST00000410773 322 ntBASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 TAS2R2P-201ENST00000421146 910 ntBASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 SETP9-201ENST00000423837 832 ntBASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RBFOX3A6NFN3 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms