Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC022325.1-201ENST00000502748 2199 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 AL050335.1-201ENST00000396909 869 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 CYP4F30P-202ENST00000420048 405 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 AC242426.1-201ENST00000435270 960 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 AC009237.1-201ENST00000442127 744 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 SUMO2P7-201ENST00000511179 285 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 BX323046.1-201ENST00000610145 535 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 PPIAP10-201ENST00000438675 458 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 CST12P-201ENST00000457644 362 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 Y_RNA.710-201ENST00000516975 110 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 OR4H6P-201ENST00000563771 921 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 AP001437.1-201ENST00000608783 456 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 AC022400.9-201ENST00000623633 273 ntBASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP2Q96SN8 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 AC024651.2-201ENST00000562480 2098 ntBASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 HIGD1AP16-201ENST00000450986 258 ntBASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 AC018638.3-201ENST00000461273 132 ntBASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 AC092332.1-201ENST00000563684 829 ntBASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 AC097467.4-201ENST00000605504 141 ntBASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 AP002364.1-201ENST00000623330 3386 ntBASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 FO393409.1-201ENST00000399325 1372 ntBASIC7.42□□□□□ -1.22
CDK5RAP2Q96SN8 AC011369.2-201ENST00000624423 1567 ntBASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 EIF3EP1-201ENST00000433978 1316 ntBASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 RN7SL221P-201ENST00000466190 281 ntBASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 Y_RNA.667-201ENST00000516212 107 ntBASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 AC027369.2-201ENST00000528030 440 ntBASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 AC068305.2-201ENST00000550567 1205 ntBASIC7.41□□□□□ -1.22
CDK5RAP2Q96SN8 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms