Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 MIR6719-201ENST00000622428 87 ntBASIC7.75□□□□□ -1.17
SNED1Q8TER0 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 AC023245.2-201ENST00000530760 2978 ntBASIC7.75□□□□□ -1.17
SNED1Q8TER0 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.75□□□□□ -1.17
SNED1Q8TER0 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SNED1Q8TER0 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 AC122713.2-201ENST00000624942 3335 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNED1Q8TER0 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNED1Q8TER0 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 CLCA3P-203ENST00000490028 2781 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 SUMO2P3-201ENST00000438311 288 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 DNAJC19P5-201ENST00000443295 316 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 RPS27AP2-201ENST00000457576 465 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 RN7SL714P-201ENST00000487050 298 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 AC008638.1-201ENST00000506035 866 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 RNA5SP362-201ENST00000516048 118 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNED1Q8TER0 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 AP005119.1-201ENST00000580956 292 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 MRPL57P1-201ENST00000621486 265 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNED1Q8TER0 AC006058.1-201ENST00000568686 5067 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNED1Q8TER0 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SNED1Q8TER0 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.74□□□□□ -1.17
SNED1Q8TER0 AC062029.1-202ENST00000606164 3651 ntBASIC7.74□□□□□ -1.17
SNED1Q8TER0 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SNED1Q8TER0 PSG10P-201ENST00000501199 1500 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 AC096537.2-201ENST00000413707 714 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 Z93019.1-201ENST00000416450 973 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 GAPDHP75-201ENST00000433910 943 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 OR3D1P-201ENST00000438288 955 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 AC074386.1-201ENST00000476560 767 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 AC025171.4-201ENST00000607250 1047 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 AL136228.1-201ENST00000622221 319 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 AC130360.2-201ENST00000533477 1556 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.73□□□□□ -1.17
SNED1Q8TER0 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 SHQ1P1-201ENST00000437111 1544 ntBASIC7.73□□□□□ -1.17
SNED1Q8TER0 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SNED1Q8TER0 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 AC015689.2-201ENST00000528172 1738 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms