Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC71LQ8N9Z2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC110373.1-201ENST00000505994 3505 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 RNA5SP478-201ENST00000364657 115 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 RPL23AP17-201ENST00000401064 499 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 UBE2V1P14-201ENST00000415815 558 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC023141.1-201ENST00000419418 379 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC103563.5-201ENST00000455643 364 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 OR7E7P-201ENST00000455678 1012 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 RPL23AP64-201ENST00000469465 435 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AL355032.1-201ENST00000472981 438 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AL135933.1-201ENST00000498657 802 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 SUMO2P4-201ENST00000504193 276 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC015674.1-201ENST00000578482 267 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AL139041.1-201ENST00000605480 610 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 PTCHD3P1-201ENST00000612350 537 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC106782.7-201ENST00000624024 418 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC133555.5-201ENST00000624430 418 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC140479.4-205ENST00000636339 820 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AL161912.4-201ENST00000623889 2468 ntBASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC71LQ8N9Z2 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC023245.2-201ENST00000530760 2978 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 ICE2P1-201ENST00000512800 1849 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 BX005266.3-201ENST00000443013 1075 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 GAPDHP38-201ENST00000503632 1002 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 RNU6-964P-201ENST00000516524 69 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 IGKV1D-22-201ENST00000518953 324 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AL445383.1-201ENST00000554689 874 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 PPIAP6-201ENST00000557078 499 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 NDUFA3P1-201ENST00000588007 252 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC024255.1-201ENST00000614376 102 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC133485.6-201ENST00000624045 688 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC093844.1-201ENST00000514910 1361 ntBASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms