Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PABPC1P8-201ENST00000452851 2086 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AC024651.2-201ENST00000562480 2098 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 OR7E156P-201ENST00000400303 464 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AL512593.1-201ENST00000444758 779 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 PPIAP7-201ENST00000454070 489 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 PFN1P8-201ENST00000497012 543 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AP000620.1-201ENST00000527147 504 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 TOMM20P1-201ENST00000534518 427 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AC022106.1-201ENST00000612834 766 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 TCL6_3.1-201ENST00000619064 137 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AL162377.2-201ENST00000624532 337 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 CASC22-202ENST00000628396 802 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AC011369.2-201ENST00000624423 1567 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AL354854.1-201ENST00000455940 1363 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 AC011815.2-201ENST00000618230 2021 ntBASIC9.85□□□□□ -0.83
VPS8Q8N3P4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
VPS8Q8N3P4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AC027575.3-201ENST00000583058 2747 ntBASIC9.84□□□□□ -0.83
VPS8Q8N3P4 RN7SKP275-201ENST00000364626 301 ntBASIC9.84□□□□□ -0.83
VPS8Q8N3P4 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 GAPDHP23-201ENST00000444823 993 ntBASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 HMGB1P7-201ENST00000450921 612 ntBASIC9.84□□□□□ -0.83
VPS8Q8N3P4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AC096754.1-201ENST00000508904 818 ntBASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 IGHV1-14-201ENST00000523391 241 ntBASIC9.84□□□□□ -0.83
VPS8Q8N3P4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 CYCSP1-201ENST00000604815 315 ntBASIC9.84□□□□□ -0.83
VPS8Q8N3P4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AC127024.8-201ENST00000623719 2094 ntBASIC9.84□□□□□ -0.83
VPS8Q8N3P4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AL391261.1-201ENST00000555712 1479 ntBASIC9.84□□□□□ -0.83
VPS8Q8N3P4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 AL008638.3-201ENST00000623027 5182 ntBASIC9.84□□□□□ -0.83
VPS8Q8N3P4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
VPS8Q8N3P4 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 AC023141.3-201ENST00000436698 278 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 PPIAP10-201ENST00000438675 458 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 AC010240.2-201ENST00000445363 1205 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 RN7SL165P-201ENST00000477476 291 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 CR383658.1-201ENST00000514609 734 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 AC011853.1-201ENST00000518911 454 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 CYCSP38-201ENST00000559840 322 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 AC024255.1-201ENST00000614376 102 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 FAM27E2-201ENST00000619668 403 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 AC022726.2-201ENST00000634673 547 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 OR7A1P-202ENST00000641542 1158 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 CAP1P2-201ENST00000417455 1409 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 CDY10P-201ENST00000452415 1567 ntBASIC9.83□□□□□ -0.84
VPS8Q8N3P4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC9.83□□□□□ -0.84
VPS8Q8N3P4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms