Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 AC091193.1-201ENST00000604640 448 ntBASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 AC139792.1-201ENST00000607051 647 ntBASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 AC092574.1-201ENST00000609771 420 ntBASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 KYNUP2-201ENST00000582280 1329 ntBASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
ZNF549Q6P9A3 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AC004023.1-201ENST00000561473 1744 ntBASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AC092106.2-201ENST00000436597 487 ntBASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 MGAT2P1-201ENST00000449718 797 ntBASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AKR1D1P1-201ENST00000457236 936 ntBASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AC122714.1-201ENST00000502510 459 ntBASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AF117829.2-201ENST00000619538 361 ntBASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AL512356.3-201ENST00000623005 461 ntBASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AC073592.7-201ENST00000623659 507 ntBASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.43□□□□□ -1.38
ZNF549Q6P9A3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC011455.2-201ENST00000599320 3336 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 MTCO1P46-201ENST00000451639 1491 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 MRPS6P2-201ENST00000381143 370 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 RANP6-201ENST00000413691 644 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 FAM204CP-201ENST00000424489 642 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 ELOCP6-201ENST00000429066 328 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC009237.1-201ENST00000442127 744 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 ELOCP12-201ENST00000458706 328 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC022206.1-201ENST00000495947 347 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC009567.2-201ENST00000502989 349 ntBASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ZNF549Q6P9A3 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms