Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC4P56524 SNORA81.2-201ENST00000516868 170 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.92□□□□□ -1.3
HDAC4P56524 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC4P56524 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.92□□□□□ -1.3
HDAC4P56524 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC4P56524 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC4P56524 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.92□□□□□ -1.3
HDAC4P56524 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.92□□□□□ -1.3
HDAC4P56524 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 OR7A11P-201ENST00000597719 953 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 AL445647.2-201ENST00000615170 130 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 AL139384.2-201ENST00000613809 3590 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 AC010132.4-201ENST00000569883 1368 ntBASIC6.92□□□□□ -1.3
HDAC4P56524 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.92□□□□□ -1.3
HDAC4P56524 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HDAC4P56524 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC4P56524 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC4P56524 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC4P56524 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC4P56524 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC4P56524 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HDAC4P56524 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC4P56524 AKAP17BP-201ENST00000431706 2719 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HDAC4P56524 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
HDAC4P56524 SNORA38B-201ENST00000363524 131 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 RN7SKP118-201ENST00000364331 330 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 AC092634.1-201ENST00000366505 199 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HDAC4P56524 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.91□□□□□ -1.3
HDAC4P56524 PCNPP2-201ENST00000441651 455 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 BMS1P11-201ENST00000442351 885 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.91□□□□□ -1.3
HDAC4P56524 AC022080.2-201ENST00000452932 533 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 BMS1P9-201ENST00000457640 885 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 RN7SKP198-201ENST00000459286 306 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 AC063955.1-201ENST00000462872 685 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 RPL23AP64-201ENST00000469465 435 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 AC083906.1-201ENST00000509298 406 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 RN7SKP196-201ENST00000516267 345 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.91□□□□□ -1.3
HDAC4P56524 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.91□□□□□ -1.3
HDAC4P56524 AC023310.2-201ENST00000553844 547 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.91□□□□□ -1.3
HDAC4P56524 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.91□□□□□ -1.3
HDAC4P56524 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.91□□□□□ -1.3
HDAC4P56524 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC4P56524 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 AL683813.2-201ENST00000605245 502 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 AC005277.2-201ENST00000617898 390 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 PSMC1P4-201ENST00000515236 1327 ntBASIC6.91□□□□□ -1.3
HDAC4P56524 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC4P56524 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC4P56524 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
HDAC4P56524 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HDAC4P56524 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HDAC4P56524 AC007114.2-201ENST00000576014 4281 ntBASIC6.9□□□□□ -1.3
HDAC4P56524 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HDAC4P56524 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
HDAC4P56524 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.9□□□□□ -1.3
HDAC4P56524 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.9□□□□□ -1.3
HDAC4P56524 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HDAC4P56524 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HDAC4P56524 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HDAC4P56524 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.9□□□□□ -1.3
HDAC4P56524 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.9□□□□□ -1.3
HDAC4P56524 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HDAC4P56524 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HDAC4P56524 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms