Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC023158.1-201ENST00000561632 1025 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.3□□□□□ -1.4
SUMO3P55854 RN7SL199P-201ENST00000578752 281 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 RN7SL656P-201ENST00000579044 281 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 RN7SL404P-201ENST00000582421 281 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 MIR5682-201ENST00000584864 76 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 AC096947.1-201ENST00000603233 470 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 NDUFB9P1-201ENST00000604683 510 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.3□□□□□ -1.4
SUMO3P55854 AP003476.1-201ENST00000623984 516 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 NBPF8-201ENST00000583271 5330 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.3□□□□□ -1.4
SUMO3P55854 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.3□□□□□ -1.4
SUMO3P55854 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
SUMO3P55854 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 MFSD8-217ENST00000641178 4374 ntBASIC6.3□□□□□ -1.4
SUMO3P55854 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.3□□□□□ -1.4
SUMO3P55854 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SUMO3P55854 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SUMO3P55854 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.3□□□□□ -1.4
SUMO3P55854 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.29□□□□□ -1.4
SUMO3P55854 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 AL359715.3-201ENST00000569267 2123 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.29□□□□□ -1.4
SUMO3P55854 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SUMO3P55854 RNU6-316P-201ENST00000391027 107 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.29□□□□□ -1.4
SUMO3P55854 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.29□□□□□ -1.4
SUMO3P55854 RN7SKP137-201ENST00000411074 307 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 CDY5P-201ENST00000411487 1580 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AL139135.1-201ENST00000412675 209 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 NIFKP3-201ENST00000417799 865 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.29□□□□□ -1.4
SUMO3P55854 MTND4LP13-201ENST00000425022 298 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 AL596268.1-201ENST00000427910 1048 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AC114402.2-201ENST00000432760 643 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.29□□□□□ -1.4
SUMO3P55854 AL645931.1-201ENST00000439737 410 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 RNFT1P2-201ENST00000443064 757 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 RBMY3AP-201ENST00000449381 1145 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 GOT2P2-201ENST00000450663 1251 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 CDY9P-201ENST00000451397 1580 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 RPL23AP23-201ENST00000452590 471 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AL096803.1-201ENST00000456921 1021 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 RPL32P14-201ENST00000463196 378 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 RN7SL259P-201ENST00000478499 253 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 RN7SL379P-201ENST00000479912 293 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 RN7SL849P-201ENST00000485236 295 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 NAMPTP2-201ENST00000505629 1115 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.29□□□□□ -1.4
SUMO3P55854 MTCO3P27-201ENST00000514397 196 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AC110760.3-202ENST00000515177 371 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.29□□□□□ -1.4
SUMO3P55854 AP003355.1-201ENST00000518956 587 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 OR5D2P-201ENST00000524390 911 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AP006587.5-201ENST00000532033 739 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AP001804.2-201ENST00000533932 910 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.29□□□□□ -1.4
SUMO3P55854 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 AL512310.9-201ENST00000553311 948 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AC025918.2-201ENST00000558683 763 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AL132640.1-201ENST00000559594 619 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.29□□□□□ -1.4
SUMO3P55854 RN7SL657P-201ENST00000582431 293 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.29□□□□□ -1.4
SUMO3P55854 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SUMO3P55854 AC093635.1-201ENST00000609028 555 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AC091768.1-201ENST00000609258 930 ntBASIC6.29□□□□□ -1.4
SUMO3P55854 AP000864.1-201ENST00000609424 650 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms