Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.42□□□□□ -1.22
HMGCS2P54868 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
HMGCS2P54868 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGCS2P54868 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGCS2P54868 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.42□□□□□ -1.22
HMGCS2P54868 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGCS2P54868 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGCS2P54868 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
HMGCS2P54868 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGCS2P54868 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGCS2P54868 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGCS2P54868 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HMGCS2P54868 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.41□□□□□ -1.22
HMGCS2P54868 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HMGCS2P54868 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HMGCS2P54868 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HMGCS2P54868 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HMGCS2P54868 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.41□□□□□ -1.22
HMGCS2P54868 RNA5SP510-201ENST00000364697 99 ntBASIC7.41□□□□□ -1.22
HMGCS2P54868 SLC20A1P1-201ENST00000413906 956 ntBASIC7.41□□□□□ -1.22
HMGCS2P54868 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.41□□□□□ -1.22
HMGCS2P54868 RN7SL834P-201ENST00000461450 286 ntBASIC7.41□□□□□ -1.22
HMGCS2P54868 AC021074.2-201ENST00000468434 172 ntBASIC7.41□□□□□ -1.22
HMGCS2P54868 RN7SKP238-201ENST00000516483 249 ntBASIC7.41□□□□□ -1.22
HMGCS2P54868 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.41□□□□□ -1.22
HMGCS2P54868 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.41□□□□□ -1.22
HMGCS2P54868 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.41□□□□□ -1.22
HMGCS2P54868 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.41□□□□□ -1.22
HMGCS2P54868 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.41□□□□□ -1.22
HMGCS2P54868 AC090616.1-201ENST00000583895 447 ntBASIC7.41□□□□□ -1.22
HMGCS2P54868 AC027243.2-201ENST00000602530 724 ntBASIC7.41□□□□□ -1.22
HMGCS2P54868 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.41□□□□□ -1.22
HMGCS2P54868 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.41□□□□□ -1.22
HMGCS2P54868 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.41□□□□□ -1.22
HMGCS2P54868 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.41□□□□□ -1.22
HMGCS2P54868 MFSD8-217ENST00000641178 4374 ntBASIC7.41□□□□□ -1.22
HMGCS2P54868 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HMGCS2P54868 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
HMGCS2P54868 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HMGCS2P54868 MTCO1P28-201ENST00000574177 1528 ntBASIC7.41□□□□□ -1.22
HMGCS2P54868 AC091305.2-201ENST00000624049 1576 ntBASIC7.41□□□□□ -1.22
HMGCS2P54868 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HMGCS2P54868 KARSP1-201ENST00000451871 1752 ntBASIC7.41□□□□□ -1.22
HMGCS2P54868 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.41□□□□□ -1.22
HMGCS2P54868 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGCS2P54868 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
HMGCS2P54868 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGCS2P54868 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HMGCS2P54868 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.4□□□□□ -1.22
HMGCS2P54868 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGCS2P54868 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGCS2P54868 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGCS2P54868 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
HMGCS2P54868 AC110597.1-201ENST00000562669 3176 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGCS2P54868 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.4□□□□□ -1.22
HMGCS2P54868 OR7E25P-201ENST00000344844 931 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 RN7SKP69-201ENST00000365390 305 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 MIR541-201ENST00000401360 84 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGCS2P54868 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGCS2P54868 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGCS2P54868 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGCS2P54868 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGCS2P54868 AL353662.1-201ENST00000439099 327 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 YWHABP1-201ENST00000445359 727 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.4□□□□□ -1.22
HMGCS2P54868 RPL34P33-201ENST00000486062 334 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.4□□□□□ -1.22
HMGCS2P54868 AC060775.1-201ENST00000518241 520 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.4□□□□□ -1.22
HMGCS2P54868 AC100767.2-201ENST00000604840 693 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.4□□□□□ -1.22
HMGCS2P54868 AP000894.4-201ENST00000610185 483 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 AC012653.2-201ENST00000621880 420 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 AC129915.3-201ENST00000634128 948 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 EIF3EP1-201ENST00000433978 1316 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGCS2P54868 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGCS2P54868 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
HMGCS2P54868 AL133243.2-201ENST00000610331 1621 ntBASIC7.4□□□□□ -1.22
HMGCS2P54868 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
HMGCS2P54868 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
HMGCS2P54868 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.4□□□□□ -1.23
HMGCS2P54868 AC083806.2-201ENST00000617795 2685 ntBASIC7.4□□□□□ -1.23
HMGCS2P54868 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.23
HMGCS2P54868 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.4□□□□□ -1.23
HMGCS2P54868 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
HMGCS2P54868 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
HMGCS2P54868 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.23
HMGCS2P54868 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.39□□□□□ -1.23
HMGCS2P54868 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
HMGCS2P54868 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
HMGCS2P54868 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.39□□□□□ -1.23
HMGCS2P54868 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms