Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 Z99496.1-201ENST00000469424 1477 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 XRCC6P3-201ENST00000422187 1621 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
RNF144AP50876 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 OR4G1P-202ENST00000641173 1788 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF144AP50876 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 SKAP1-201ENST00000336915 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF144AP50876 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF144AP50876 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 RNA5SP145-201ENST00000363124 125 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 RNU5F-7P-201ENST00000363696 115 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 RNA5SP27-201ENST00000363839 119 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF144AP50876 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 SNORA73.3-201ENST00000410213 189 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AC007435.1-201ENST00000421086 415 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 MYL6BP1-201ENST00000429485 615 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 RPE-205ENST00000429907 925 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF144AP50876 AC005534.2-201ENST00000431047 433 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 DEFA9P-201ENST00000433042 285 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AC104850.1-201ENST00000435940 476 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AL512286.1-201ENST00000439244 400 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF144AP50876 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF144AP50876 YWHAZP2-201ENST00000440317 728 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF144AP50876 MTCO2P25-201ENST00000447065 681 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF144AP50876 MTCO3P11-201ENST00000455103 774 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 OR6K1P-201ENST00000456766 971 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 BUB3P1-201ENST00000458451 999 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 RPL19P13-201ENST00000483119 583 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 RPS4XP15-201ENST00000489210 795 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 PTPRG-AS1-209ENST00000495542 502 ntTSL 4 BASIC7.74□□□□□ -1.17
RNF144AP50876 HNRNPA1P44-201ENST00000503999 879 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AC106774.1-201ENST00000515105 321 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC7.74□□□□□ -1.17
RNF144AP50876 PSAT1P1-201ENST00000518968 1106 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 FABP5P7-201ENST00000524732 405 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AP001767.2-201ENST00000527291 382 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF144AP50876 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF144AP50876 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF144AP50876 STXBP6-204ENST00000546511 1223 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 DDIT3-205ENST00000552740 951 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 GTF2IP22-201ENST00000554443 182 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AL357153.2-201ENST00000556646 565 ntTSL 4 BASIC7.74□□□□□ -1.17
RNF144AP50876 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC7.74□□□□□ -1.17
RNF144AP50876 AC044913.1-201ENST00000557200 430 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF144AP50876 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.74□□□□□ -1.17
RNF144AP50876 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC7.74□□□□□ -1.17
RNF144AP50876 MIR548AB-201ENST00000584917 84 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 AC008752.3-201ENST00000588113 712 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF144AP50876 AC026150.3-201ENST00000602595 499 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF144AP50876 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF144AP50876 AC018765.1-201ENST00000623357 3446 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 UGT2B24P-201ENST00000514441 1597 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC7.74□□□□□ -1.17
RNF144AP50876 PABPC1P9-201ENST00000426076 1612 ntBASIC7.74□□□□□ -1.17
RNF144AP50876 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF144AP50876 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF144AP50876 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RNF144AP50876 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
RNF144AP50876 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF144AP50876 BCL9P1-201ENST00000506012 2561 ntBASIC7.73□□□□□ -1.17
RNF144AP50876 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF144AP50876 ANAPC5-218ENST00000541887 2400 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF144AP50876 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF144AP50876 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF144AP50876 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RNF144AP50876 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms