Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SLC1A1P43005 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC1A1P43005 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.73□□□□□ -1.33
SLC1A1P43005 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
SLC1A1P43005 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC1A1P43005 AL353763.1-201ENST00000624467 1628 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC1A1P43005 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC1A1P43005 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.73□□□□□ -1.33
SLC1A1P43005 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SLC1A1P43005 BIN2P1-201ENST00000504996 1530 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.73□□□□□ -1.33
SLC1A1P43005 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC1A1P43005 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC1A1P43005 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SLC1A1P43005 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SLC1A1P43005 AL672212.1-201ENST00000422246 400 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 PTPN2P1-201ENST00000423212 1072 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 AL589794.1-201ENST00000424971 390 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 VN1R53P-201ENST00000429536 957 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 MED28P4-201ENST00000433137 572 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.73□□□□□ -1.33
SLC1A1P43005 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC1A1P43005 RPS3AP49-201ENST00000472161 790 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 MARK2P8-201ENST00000476069 952 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.73□□□□□ -1.33
SLC1A1P43005 RN7SKP248-201ENST00000516278 305 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 RNA5SP75-201ENST00000516841 111 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.73□□□□□ -1.33
SLC1A1P43005 AC103855.4-201ENST00000533158 265 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 AC092718.4-201ENST00000566639 716 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.73□□□□□ -1.33
SLC1A1P43005 AC100832.2-201ENST00000582080 776 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.73□□□□□ -1.33
SLC1A1P43005 RPL7AP69-201ENST00000595306 806 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 AC012511.1-201ENST00000608140 449 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 AC022726.2-201ENST00000634673 547 ntBASIC6.73□□□□□ -1.33
SLC1A1P43005 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SLC1A1P43005 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
SLC1A1P43005 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SLC1A1P43005 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC1A1P43005 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SLC1A1P43005 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC1A1P43005 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.73□□□□□ -1.33
SLC1A1P43005 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SLC1A1P43005 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 AC009220.2-201ENST00000489759 1751 ntBASIC6.72□□□□□ -1.33
SLC1A1P43005 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.72□□□□□ -1.33
SLC1A1P43005 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 AL355377.1-201ENST00000621125 1653 ntBASIC6.72□□□□□ -1.33
SLC1A1P43005 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.72□□□□□ -1.33
SLC1A1P43005 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SLC1A1P43005 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.72□□□□□ -1.33
SLC1A1P43005 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC1A1P43005 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 AC103563.5-201ENST00000455643 364 ntBASIC6.72□□□□□ -1.33
SLC1A1P43005 AL354872.1-201ENST00000456361 967 ntBASIC6.72□□□□□ -1.33
SLC1A1P43005 AKR1D1P1-201ENST00000457236 936 ntBASIC6.72□□□□□ -1.33
SLC1A1P43005 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.72□□□□□ -1.33
SLC1A1P43005 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.72□□□□□ -1.33
SLC1A1P43005 COX6B1P4-201ENST00000519826 484 ntBASIC6.72□□□□□ -1.33
SLC1A1P43005 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC1A1P43005 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC1A1P43005 AP001804.1-201ENST00000526868 919 ntBASIC6.72□□□□□ -1.33
SLC1A1P43005 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.72□□□□□ -1.33
SLC1A1P43005 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC1A1P43005 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.72□□□□□ -1.33
SLC1A1P43005 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.72□□□□□ -1.33
SLC1A1P43005 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.72□□□□□ -1.33
SLC1A1P43005 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.72□□□□□ -1.33
SLC1A1P43005 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.72□□□□□ -1.33
SLC1A1P43005 AC004805.3-201ENST00000603178 310 ntBASIC6.72□□□□□ -1.33
SLC1A1P43005 AC012175.1-201ENST00000603755 531 ntBASIC6.72□□□□□ -1.33
SLC1A1P43005 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.72□□□□□ -1.33
SLC1A1P43005 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.72□□□□□ -1.33
SLC1A1P43005 AC068769.1-201ENST00000474767 2426 ntBASIC6.72□□□□□ -1.33
SLC1A1P43005 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SLC1A1P43005 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.72□□□□□ -1.33
SLC1A1P43005 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.72□□□□□ -1.33
SLC1A1P43005 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SLC1A1P43005 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.72□□□□□ -1.33
SLC1A1P43005 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
SLC1A1P43005 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SLC1A1P43005 AC092692.1-201ENST00000623625 2595 ntBASIC6.71□□□□□ -1.33
SLC1A1P43005 SHQ1P1-201ENST00000437111 1544 ntBASIC6.71□□□□□ -1.33
SLC1A1P43005 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
SLC1A1P43005 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SLC1A1P43005 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SLC1A1P43005 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.71□□□□□ -1.33
SLC1A1P43005 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SLC1A1P43005 SMG1P5-202ENST00000529428 4219 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms