Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.06□□□□□ -1.44
RFC3P40938 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.06□□□□□ -1.44
RFC3P40938 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RFC3P40938 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.06□□□□□ -1.44
RFC3P40938 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.06□□□□□ -1.44
RFC3P40938 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RFC3P40938 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.06□□□□□ -1.44
RFC3P40938 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RFC3P40938 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.06□□□□□ -1.44
RFC3P40938 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.06□□□□□ -1.44
RFC3P40938 AC093297.3-201ENST00000607056 2517 ntBASIC6.05□□□□□ -1.44
RFC3P40938 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.05□□□□□ -1.44
RFC3P40938 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.05□□□□□ -1.44
RFC3P40938 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.05□□□□□ -1.44
RFC3P40938 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
RFC3P40938 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 YWHAZP4-201ENST00000392459 708 ntBASIC6.05□□□□□ -1.44
RFC3P40938 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RFC3P40938 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.05□□□□□ -1.44
RFC3P40938 AL359885.1-201ENST00000415786 903 ntBASIC6.05□□□□□ -1.44
RFC3P40938 RPL23AP18-201ENST00000416139 468 ntBASIC6.05□□□□□ -1.44
RFC3P40938 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC3P40938 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RFC3P40938 HSPE1P27-201ENST00000430808 296 ntBASIC6.05□□□□□ -1.44
RFC3P40938 BMP6P1-201ENST00000431230 679 ntBASIC6.05□□□□□ -1.44
RFC3P40938 AL354893.1-201ENST00000433735 348 ntBASIC6.05□□□□□ -1.44
RFC3P40938 ARMC4P1-201ENST00000438905 707 ntBASIC6.05□□□□□ -1.44
RFC3P40938 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.05□□□□□ -1.44
RFC3P40938 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC3P40938 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.05□□□□□ -1.44
RFC3P40938 UBBP5-201ENST00000446970 266 ntBASIC6.05□□□□□ -1.44
RFC3P40938 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC3P40938 AC095057.1-201ENST00000507583 168 ntBASIC6.05□□□□□ -1.44
RFC3P40938 AC122713.1-201ENST00000518368 1015 ntBASIC6.05□□□□□ -1.44
RFC3P40938 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.05□□□□□ -1.44
RFC3P40938 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.05□□□□□ -1.44
RFC3P40938 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 TDGP1-201ENST00000543961 1229 ntBASIC6.05□□□□□ -1.44
RFC3P40938 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC3P40938 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC3P40938 AC026956.1-201ENST00000558741 396 ntBASIC6.05□□□□□ -1.44
RFC3P40938 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 AC092718.4-201ENST00000566639 716 ntBASIC6.05□□□□□ -1.44
RFC3P40938 MT1CP-201ENST00000567054 174 ntBASIC6.05□□□□□ -1.44
RFC3P40938 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.05□□□□□ -1.44
RFC3P40938 AC133552.4-201ENST00000576103 676 ntBASIC6.05□□□□□ -1.44
RFC3P40938 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.05□□□□□ -1.44
RFC3P40938 AC011891.2-201ENST00000604949 397 ntBASIC6.05□□□□□ -1.44
RFC3P40938 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.05□□□□□ -1.44
RFC3P40938 AL352984.2-202ENST00000613699 155 ntBASIC6.05□□□□□ -1.44
RFC3P40938 AC012254.5-201ENST00000623573 478 ntBASIC6.05□□□□□ -1.44
RFC3P40938 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC3P40938 AC022034.1-201ENST00000512867 2156 ntBASIC6.05□□□□□ -1.44
RFC3P40938 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC3P40938 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.05□□□□□ -1.44
RFC3P40938 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.05□□□□□ -1.44
RFC3P40938 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.05□□□□□ -1.44
RFC3P40938 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 AC005618.1-201ENST00000606901 3148 ntBASIC6.05□□□□□ -1.44
RFC3P40938 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.05□□□□□ -1.44
RFC3P40938 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.05□□□□□ -1.44
RFC3P40938 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC3P40938 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.04□□□□□ -1.44
RFC3P40938 AC022613.3-201ENST00000560740 1346 ntBASIC6.04□□□□□ -1.44
RFC3P40938 AC023245.2-201ENST00000530760 2978 ntBASIC6.04□□□□□ -1.44
RFC3P40938 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 TMCC1P1-201ENST00000518897 1980 ntBASIC6.04□□□□□ -1.44
RFC3P40938 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.04□□□□□ -1.44
RFC3P40938 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RFC3P40938 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC3P40938 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RFC3P40938 RNA5SP485-201ENST00000365053 119 ntBASIC6.04□□□□□ -1.44
RFC3P40938 RNA5SP77-201ENST00000365394 120 ntBASIC6.04□□□□□ -1.44
RFC3P40938 RN7SKP187-201ENST00000365536 330 ntBASIC6.04□□□□□ -1.44
RFC3P40938 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RFC3P40938 MIR199B-201ENST00000384849 110 ntBASIC6.04□□□□□ -1.44
RFC3P40938 MIR621-201ENST00000384919 96 ntBASIC6.04□□□□□ -1.44
RFC3P40938 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.04□□□□□ -1.44
RFC3P40938 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 GPN3P1-201ENST00000423883 535 ntBASIC6.04□□□□□ -1.44
RFC3P40938 CDK7P1-201ENST00000434574 693 ntBASIC6.04□□□□□ -1.44
RFC3P40938 PMS2P9-201ENST00000441237 515 ntBASIC6.04□□□□□ -1.44
RFC3P40938 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 CCNJP1-201ENST00000450600 1149 ntBASIC6.04□□□□□ -1.44
RFC3P40938 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC3P40938 RN7SL39P-201ENST00000462264 297 ntBASIC6.04□□□□□ -1.44
RFC3P40938 AC005017.1-201ENST00000482002 490 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms