Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
POLR2AP24928 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
POLR2AP24928 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.46□□□□□ -1.21
POLR2AP24928 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.46□□□□□ -1.21
POLR2AP24928 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.46□□□□□ -1.21
POLR2AP24928 AC079776.5-201ENST00000641920 211 ntBASIC7.46□□□□□ -1.21
POLR2AP24928 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
POLR2AP24928 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
POLR2AP24928 AL359694.2-201ENST00000567753 1615 ntBASIC7.46□□□□□ -1.22
POLR2AP24928 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
POLR2AP24928 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.46□□□□□ -1.22
POLR2AP24928 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.46□□□□□ -1.22
POLR2AP24928 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 AC106872.5-201ENST00000508856 1416 ntBASIC7.46□□□□□ -1.22
POLR2AP24928 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
POLR2AP24928 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
POLR2AP24928 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.46□□□□□ -1.22
POLR2AP24928 AC013470.3-201ENST00000420252 1194 ntBASIC7.46□□□□□ -1.22
POLR2AP24928 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC7.46□□□□□ -1.22
POLR2AP24928 AL035660.1-201ENST00000422041 222 ntBASIC7.46□□□□□ -1.22
POLR2AP24928 CYP4F32P-201ENST00000426492 504 ntBASIC7.46□□□□□ -1.22
POLR2AP24928 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC7.46□□□□□ -1.22
POLR2AP24928 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.46□□□□□ -1.22
POLR2AP24928 HIGD1AP16-201ENST00000450986 258 ntBASIC7.46□□□□□ -1.22
POLR2AP24928 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.46□□□□□ -1.22
POLR2AP24928 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.46□□□□□ -1.22
POLR2AP24928 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.46□□□□□ -1.22
POLR2AP24928 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC7.46□□□□□ -1.22
POLR2AP24928 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.46□□□□□ -1.22
POLR2AP24928 AL356801.1-201ENST00000559320 294 ntBASIC7.46□□□□□ -1.22
POLR2AP24928 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.46□□□□□ -1.22
POLR2AP24928 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.46□□□□□ -1.22
POLR2AP24928 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.46□□□□□ -1.22
POLR2AP24928 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.45□□□□□ -1.22
POLR2AP24928 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
POLR2AP24928 SNORA21-201ENST00000362423 132 ntBASIC7.45□□□□□ -1.22
POLR2AP24928 MTND2P15-201ENST00000418575 892 ntBASIC7.45□□□□□ -1.22
POLR2AP24928 AC245047.5-201ENST00000437312 556 ntBASIC7.45□□□□□ -1.22
POLR2AP24928 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.45□□□□□ -1.22
POLR2AP24928 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.45□□□□□ -1.22
POLR2AP24928 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC7.45□□□□□ -1.22
POLR2AP24928 AC104629.1-201ENST00000494226 508 ntBASIC7.45□□□□□ -1.22
POLR2AP24928 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.45□□□□□ -1.22
POLR2AP24928 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.45□□□□□ -1.22
POLR2AP24928 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.45□□□□□ -1.22
POLR2AP24928 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.45□□□□□ -1.22
POLR2AP24928 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 ARHGAP42P2-201ENST00000416089 2140 ntBASIC7.45□□□□□ -1.22
POLR2AP24928 AC105342.1-201ENST00000378334 6848 ntBASIC7.45□□□□□ -1.22
POLR2AP24928 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC7.45□□□□□ -1.22
POLR2AP24928 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.45□□□□□ -1.22
POLR2AP24928 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
POLR2AP24928 CASC19-228ENST00000641414 1684 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.44□□□□□ -1.22
POLR2AP24928 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 FUNDC2P3-201ENST00000334716 533 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 PPIAP10-201ENST00000438675 458 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 RN7SL705P-201ENST00000481678 294 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 AL158068.1-201ENST00000506116 616 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.44□□□□□ -1.22
POLR2AP24928 AP001823.1-201ENST00000604056 1003 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 AC025171.4-201ENST00000607250 1047 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.44□□□□□ -1.22
POLR2AP24928 AC016769.4-201ENST00000616893 535 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC7.44□□□□□ -1.22
POLR2AP24928 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.44□□□□□ -1.22
POLR2AP24928 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.44□□□□□ -1.22
POLR2AP24928 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.44□□□□□ -1.22
POLR2AP24928 MAPK10-377ENST00000642006 2752 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.44□□□□□ -1.22
POLR2AP24928 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.44□□□□□ -1.22
POLR2AP24928 AL139384.2-201ENST00000613809 3590 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms