Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC022034.1-201ENST00000512867 2156 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FREM3P0C091 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
FREM3P0C091 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC5.84□□□□□ -1.47
FREM3P0C091 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FREM3P0C091 AC007485.2-201ENST00000623493 1667 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 AP002991.2-201ENST00000623807 2801 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FREM3P0C091 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
FREM3P0C091 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
FREM3P0C091 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FREM3P0C091 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
FREM3P0C091 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
FREM3P0C091 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.84□□□□□ -1.47
FREM3P0C091 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FREM3P0C091 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC5.84□□□□□ -1.47
FREM3P0C091 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
FREM3P0C091 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
FREM3P0C091 STAG3L4-201ENST00000352103 530 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.84□□□□□ -1.47
FREM3P0C091 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.84□□□□□ -1.47
FREM3P0C091 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.84□□□□□ -1.47
FREM3P0C091 AC083862.1-201ENST00000427378 1242 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.84□□□□□ -1.47
FREM3P0C091 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.84□□□□□ -1.47
FREM3P0C091 RPSAP40-201ENST00000442343 891 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.84□□□□□ -1.47
FREM3P0C091 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.84□□□□□ -1.47
FREM3P0C091 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.84□□□□□ -1.47
FREM3P0C091 CCNJP1-201ENST00000450600 1149 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
FREM3P0C091 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.84□□□□□ -1.47
FREM3P0C091 OR7E99P-201ENST00000505750 922 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.84□□□□□ -1.47
FREM3P0C091 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.84□□□□□ -1.47
FREM3P0C091 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FREM3P0C091 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.84□□□□□ -1.47
FREM3P0C091 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.84□□□□□ -1.47
FREM3P0C091 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.84□□□□□ -1.47
FREM3P0C091 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FREM3P0C091 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.84□□□□□ -1.47
FREM3P0C091 AC067852.5-201ENST00000589299 310 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.84□□□□□ -1.47
FREM3P0C091 AC025171.4-201ENST00000607250 1047 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 AP002345.2-201ENST00000609961 904 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.84□□□□□ -1.47
FREM3P0C091 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
FREM3P0C091 AP000866.6-201ENST00000638898 3579 ntBASIC5.84□□□□□ -1.47
FREM3P0C091 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.84□□□□□ -1.48
FREM3P0C091 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.84□□□□□ -1.48
FREM3P0C091 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
FREM3P0C091 FO082842.1-201ENST00000423552 1370 ntBASIC5.84□□□□□ -1.48
FREM3P0C091 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
FREM3P0C091 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
FREM3P0C091 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
FREM3P0C091 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
FREM3P0C091 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FREM3P0C091 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FREM3P0C091 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FREM3P0C091 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
FREM3P0C091 RNA5SP77-201ENST00000365394 120 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 YWHAZP6-201ENST00000399764 738 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 MRPS21P5-201ENST00000417885 231 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.83□□□□□ -1.48
FREM3P0C091 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.83□□□□□ -1.48
FREM3P0C091 GAPDHP34-201ENST00000432112 823 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.83□□□□□ -1.48
FREM3P0C091 RPL5P14-201ENST00000494197 878 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.83□□□□□ -1.48
FREM3P0C091 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.83□□□□□ -1.48
FREM3P0C091 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.83□□□□□ -1.48
FREM3P0C091 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.83□□□□□ -1.48
FREM3P0C091 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.83□□□□□ -1.48
FREM3P0C091 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FREM3P0C091 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.83□□□□□ -1.48
FREM3P0C091 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.83□□□□□ -1.48
FREM3P0C091 AL589863.1-201ENST00000595383 631 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.83□□□□□ -1.48
FREM3P0C091 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.83□□□□□ -1.48
FREM3P0C091 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.83□□□□□ -1.48
FREM3P0C091 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FREM3P0C091 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FREM3P0C091 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
FREM3P0C091 OLMALINC-203ENST00000641087 3779 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.83□□□□□ -1.48
FREM3P0C091 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FREM3P0C091 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FREM3P0C091 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
FREM3P0C091 CUBNP3-201ENST00000457461 1784 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FREM3P0C091 AL391419.1-201ENST00000398901 1275 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 GCNT1P4-201ENST00000404096 329 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.83□□□□□ -1.48
FREM3P0C091 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.83□□□□□ -1.48
FREM3P0C091 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FREM3P0C091 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
FREM3P0C091 AC112484.3-201ENST00000505910 329 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 IGHV4-55-201ENST00000520889 368 ntBASIC5.83□□□□□ -1.48
FREM3P0C091 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.83□□□□□ -1.48
FREM3P0C091 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms