Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 COL6A4P1-201ENST00000446690 2336 ntTSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 MTND5P16-201ENST00000460269 1703 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USB1Q9BQ65 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USB1Q9BQ65 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AL008638.6-201ENST00000623947 4254 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 LINC00243-201ENST00000399196 2052 ntTSL 2 BASIC8.02□□□□□ -1.12
USB1Q9BQ65 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
USB1Q9BQ65 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
USB1Q9BQ65 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
USB1Q9BQ65 TAF9B-201ENST00000341864 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
USB1Q9BQ65 HSPA8P16-201ENST00000454171 1865 ntBASIC8.02□□□□□ -1.12
USB1Q9BQ65 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.02□□□□□ -1.12
USB1Q9BQ65 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 RBP2-201ENST00000232217 694 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 LCN1P1-201ENST00000372031 505 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 RABL2A-201ENST00000376439 623 ntTSL 5 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AL672167.2-201ENST00000377164 879 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 COX17P1-201ENST00000378775 192 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 RNU6-1300P-201ENST00000391046 108 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 RPL23AP29-201ENST00000397284 453 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AL603766.1-201ENST00000407763 664 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC092745.2-202ENST00000411880 369 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC004690.1-201ENST00000418216 328 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 LINC01687-202ENST00000419467 465 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 CCDC144NL-AS1-202ENST00000423473 839 ntTSL 5 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 TRIM26BP-206ENST00000427723 753 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 BX890604.2-201ENST00000427883 474 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AL358976.1-201ENST00000437555 392 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 BX679664.2-201ENST00000439282 283 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 IFITM4P-207ENST00000441380 420 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 POLR2CP1-201ENST00000453699 765 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 DNAJB5P1-201ENST00000454004 806 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC004947.1-202ENST00000457000 576 ntTSL 4 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC096741.1-201ENST00000472250 846 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 RN7SL621P-201ENST00000472565 299 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC105910.1-201ENST00000482585 483 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC007182.2-201ENST00000489251 402 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 SNORA19.2-201ENST00000516013 114 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 RGS5-218ENST00000526176 574 ntTSL 4 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 ACTR3C-205ENST00000539352 570 ntTSL 5 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AL442663.4-201ENST00000555304 289 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 LINGO1-AS1-203ENST00000560265 335 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC004706.2-201ENST00000576277 294 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 MTCYBP13-201ENST00000578634 1093 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC018638.8-201ENST00000588755 281 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 ZNF283-205ENST00000590950 466 ntTSL 5 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC125494.2-201ENST00000602431 657 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC011894.1-201ENST00000603255 456 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 NDUFB9P1-201ENST00000604683 510 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC103974.2-201ENST00000611319 778 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC090527.3-201ENST00000619041 548 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 TMEM182-211ENST00000640575 1155 ntTSL 5 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 MAPK10-316ENST00000641430 2285 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 UGT2B26P-201ENST00000508672 1613 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 VWA5A-204ENST00000449321 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 CASC15-203ENST00000605917 4461 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
USB1Q9BQ65 COMMD3-BMI1-205ENST00000602390 1419 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 MCC-209ENST00000515367 3844 ntTSL 5 BASIC8.02□□□□□ -1.13
USB1Q9BQ65 AC009220.2-201ENST00000489759 1751 ntBASIC8.02□□□□□ -1.13
USB1Q9BQ65 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms