Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC137695.2-201ENST00000603123 754 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX3Q99909 AC104184.1-201ENST00000607513 721 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSX3Q99909 AC091059.2-201ENST00000623355 614 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AC005753.1-201ENST00000623837 618 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX3Q99909 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSX3Q99909 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX3Q99909 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX3Q99909 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSX3Q99909 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.71□□□□□ -1.5
SSX3Q99909 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSX3Q99909 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SSX3Q99909 CREM-216ENST00000429130 1476 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX3Q99909 Z83820.1-201ENST00000456978 1499 ntBASIC5.71□□□□□ -1.5
SSX3Q99909 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SSX3Q99909 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SSX3Q99909 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX3Q99909 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSX3Q99909 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX3Q99909 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSX3Q99909 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 MIR187-201ENST00000385062 109 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSX3Q99909 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSX3Q99909 NPM1P37-201ENST00000403105 874 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 VN1R3-201ENST00000418822 919 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AC091492.1-201ENST00000419844 272 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AL121916.1-201ENST00000429405 308 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSX3Q99909 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX3Q99909 AC073072.2-201ENST00000447425 348 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AGKP1-201ENST00000455254 1263 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 MED28P7-201ENST00000456611 530 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX3Q99909 AC016687.1-201ENST00000482574 353 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC5.7□□□□□ -1.5
SSX3Q99909 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX3Q99909 AC096661.1-201ENST00000515870 822 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 SCARNA11.1-201ENST00000516918 132 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX3Q99909 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX3Q99909 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX3Q99909 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AL135978.1-201ENST00000553618 1266 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AC135626.1-201ENST00000556983 435 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.7□□□□□ -1.5
SSX3Q99909 AC016839.1-201ENST00000578162 867 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX3Q99909 WDR45BP1-201ENST00000583470 1029 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AC015818.6-201ENST00000584274 634 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 MIR5682-201ENST00000584864 76 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX3Q99909 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX3Q99909 AL713998.2-201ENST00000604538 1198 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AP003400.2-201ENST00000624036 666 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 AC127071.1-201ENST00000624997 712 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX3Q99909 AC015799.1-201ENST00000622996 3122 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX3Q99909 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX3Q99909 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX3Q99909 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX3Q99909 AC233968.1-201ENST00000611212 1300 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX3Q99909 AC090771.1-201ENST00000585803 1618 ntBASIC5.7□□□□□ -1.5
SSX3Q99909 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.7□□□□□ -1.5
SSX3Q99909 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX3Q99909 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SSX3Q99909 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX3Q99909 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
SSX3Q99909 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX3Q99909 RPL12P13-201ENST00000310055 497 ntBASIC5.69□□□□□ -1.5
SSX3Q99909 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SSX3Q99909 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX3Q99909 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms